| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1645 |
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| Symbol | rps11p |
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| ID | 5709544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 1720942 |
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| End bp | 1721340 |
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| Gene Length | 399 bp |
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| Protein Length | 132 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641276153 |
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| Product | 30S ribosomal protein S11P |
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| Protein accession | YP_001541458 |
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| Protein GI | 159042206 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0100] Ribosomal protein S11 |
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| TIGRFAM ID | [TIGR03628] archaeal ribosomal protein S11P |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0100802 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCAACAGT TGAGGAAGCT TAGGTGGGGT ATTGCTTACA TTTACGCAAG CTCTAACAAC
ACAATGATAA TTATAACTGA TTTAACAGGG AGTGAGACTG TGGCTAGGGT TAGTGGTGGG
CAGGTTGTTA AGGCTGATAG GGATAAACCA AGCCCATACG CAGCCATGAT GGCTGCCTAC
AAGGCGGCTC AAATAGCCAT GGCAAGAGGC ATTAATGCCG TTCACGTTAA GGTTAGGGGC
CCCGGTGGGT ATGGGCTTAA GGTTCCAGGA CCGGGTGCTG TTGCGGCTAT TAGGGCATTG
GCTAGGGCAG GCATGATAAT TGGCAGGATT GAGGATGTTA CCCCAATACC CCATGATACC
ATTAGGCCAC CTGGAGGTAG GAGGGGTAGG AGGGTGTAA
|
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| Protein sequence | MQQLRKLRWG IAYIYASSNN TMIIITDLTG SETVARVSGG QVVKADRDKP SPYAAMMAAY
KAAQIAMARG INAVHVKVRG PGGYGLKVPG PGAVAAIRAL ARAGMIIGRI EDVTPIPHDT
IRPPGGRRGR RV
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