| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1625 |
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| Symbol | |
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| ID | 5708618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 1700646 |
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| End bp | 1701407 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641276133 |
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| Product | thymidylate synthase, flavin-dependent |
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| Protein accession | YP_001541438 |
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| Protein GI | 159042186 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1351] Predicted alternative thymidylate synthase |
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| TIGRFAM ID | [TIGR02170] thymidylate synthase, flavin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00115057 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.386894 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTTGA TTAAGCCTTC AGTTCAATTA ATTAGAACAT GGGGTAGTGA AACCGATATT
GCTGAAATGC CCAATATCCT GTATAGGCAT GGTAATAAAA TGGCCCTTGA GAGGAGGATT
AACCTCCTCC TGAAGTATGG GCATCATAAT GTGCTTGAGT TCCTTGGCGC CCAGTGGCTT
ATTGAGTGTT CTAGGGCTTG TACACATGAG CTTGTTAGGC ATAGGTTAGC GTCGTACTGG
CAGGAATCCA CCAGGTTCGT GGATTACTCA CGGCCAGGTA ACTTAAGGTT CATAATTCCA
CCAAGCCTCA TTAATAAACT CACCCCAATC CTGGAGGGCT TAATTAAGAC GTATAGTGAA
TTACTAAACA GTACTGATAT TGATTACGCC AGGTTAATAC TACCCAATGC ACTAGCCCAG
AGGATTTGGG TTAGCATGAA TATGCGTGAA TTCCTCATAA ACTTCCTACC CCTCAGGACT
GGCCTAGGAG CATACAGTGA ACTACGCCTA ATAGCCTGGC TCATGTTCAA CAGCATACTG
GATAAATTCC CAATCACCGC CAAGTGGACT TGGGATAACT TACCCAGACT CCACCCAGAC
TATAACATCG GCTACGCTAA AAGAATGGTG AATCCCAATT ACATTGAGGA ATTGAGGAAG
AAATACGGCT CCAGCGATCC AAGGTATATA AGCGTATATT CAGCCTTTGA AGAATGGGGT
ATTCAGATTC CAAATGAACT AAGAAGATTA ATGAGCGAGT AA
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| Protein sequence | MQLIKPSVQL IRTWGSETDI AEMPNILYRH GNKMALERRI NLLLKYGHHN VLEFLGAQWL
IECSRACTHE LVRHRLASYW QESTRFVDYS RPGNLRFIIP PSLINKLTPI LEGLIKTYSE
LLNSTDIDYA RLILPNALAQ RIWVSMNMRE FLINFLPLRT GLGAYSELRL IAWLMFNSIL
DKFPITAKWT WDNLPRLHPD YNIGYAKRMV NPNYIEELRK KYGSSDPRYI SVYSAFEEWG
IQIPNELRRL MSE
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