Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1612 |
Symbol | |
ID | 5709000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1685718 |
End bp | 1686131 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641276120 |
Product | hypothetical protein |
Protein accession | YP_001541425 |
Protein GI | 159042173 |
COG category | [S] Function unknown |
COG ID | [COG0432] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00149] secondary thiamine-phosphate synthase enzyme |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGGTAT TTGTAAGGGA GCTTAAGTAC ACTTCAAGGA GGCAGGTTGA AGTCATTGAC ATAACTAGTG ATGTGGAGGG GGTTGTTAAT GAAAGCGGTA TTAAGAACGG TTTCATAATA GTGTTCGCTC CCCATGCCAC AGCGGCCATT ATACTTAATG AGGATGAGGG TGGGTTGCTC AAGGATATTG AGGATAAGAT TCTTGAATTA TTCCCAAGGA GTGGGAATTA TAGGCATAAT TTAATTGATG ATAACGCTAA CTCGCATTTA GCAAGCGCCT TCCTAGGGCA GGGTAAGGTA ATTCCCCTGG TTAATGGTTC ATTAATAAGG GGTACTTGGC AGAATATCCT CCTCGTGGAG CTTGATGGAC CTAGGGCTAT TAGGAGGGTT GTGGTTGAGG TGATTGGTGA GTGA
|
Protein sequence | MKVFVRELKY TSRRQVEVID ITSDVEGVVN ESGIKNGFII VFAPHATAAI ILNEDEGGLL KDIEDKILEL FPRSGNYRHN LIDDNANSHL ASAFLGQGKV IPLVNGSLIR GTWQNILLVE LDGPRAIRRV VVEVIGE
|
| |