Gene Cmaq_1612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1612 
Symbol 
ID5709000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1685718 
End bp1686131 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content44% 
IMG OID641276120 
Producthypothetical protein 
Protein accessionYP_001541425 
Protein GI159042173 
COG category[S] Function unknown 
COG ID[COG0432] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00149] secondary thiamine-phosphate synthase enzyme 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTAT TTGTAAGGGA GCTTAAGTAC ACTTCAAGGA GGCAGGTTGA AGTCATTGAC 
ATAACTAGTG ATGTGGAGGG GGTTGTTAAT GAAAGCGGTA TTAAGAACGG TTTCATAATA
GTGTTCGCTC CCCATGCCAC AGCGGCCATT ATACTTAATG AGGATGAGGG TGGGTTGCTC
AAGGATATTG AGGATAAGAT TCTTGAATTA TTCCCAAGGA GTGGGAATTA TAGGCATAAT
TTAATTGATG ATAACGCTAA CTCGCATTTA GCAAGCGCCT TCCTAGGGCA GGGTAAGGTA
ATTCCCCTGG TTAATGGTTC ATTAATAAGG GGTACTTGGC AGAATATCCT CCTCGTGGAG
CTTGATGGAC CTAGGGCTAT TAGGAGGGTT GTGGTTGAGG TGATTGGTGA GTGA
 
Protein sequence
MKVFVRELKY TSRRQVEVID ITSDVEGVVN ESGIKNGFII VFAPHATAAI ILNEDEGGLL 
KDIEDKILEL FPRSGNYRHN LIDDNANSHL ASAFLGQGKV IPLVNGSLIR GTWQNILLVE
LDGPRAIRRV VVEVIGE