Gene Cmaq_1610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1610 
Symbol 
ID5708661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1682304 
End bp1684190 
Gene Length1887 bp 
Protein Length628 aa 
Translation table11 
GC content45% 
IMG OID641276118 
Producthypothetical protein 
Protein accessionYP_001541423 
Protein GI159042171 
COG category[R] General function prediction only 
COG ID[COG0433] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.891235 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCAG TGGGCTACGT AATCGGCAAT AATGGCGTGG ATGAATTAAT AATGATCGCT 
AACCCAAGGT ACGCAGATGT CATTAAACTA TTCGACTACG TTTACTATGA GCATGGTGAT
TCAAGGATCC TGGCCCAGGT AACTGGGATT AATCGTGAAT TATACAGGGT CAGTGATTCA
CTGGCGCCGG TGGTTTTCAA TGATGGTGTT AAACCAGTGG AGACTGTTTT AGTTAAACTC
CTCATAATAG GTAAGAAGAC TGGGGACCTA CTGAAGCTAC CTGAGGCACC ACCACCAGTA
TCCACTCCTG TTTACCAAGC CGACCCTGAA TTAGTTAAGT CATACCTGGG TTTAAGGGGT
AGGTTATGTA TAGGTTACTT AGCCAGTATG CAGGATGTTA AGGTTTGCCT TAATGAGAAG
GCGATTAGTA GGCATATGGC TATAATAGGG GCTACTGGTA ATGGTAAGAC ATGGTTGAGT
GTACTGGTTA TTGAGGAGTT ACTGAAATTA GGGGCCACAG TACTGATACT GGATCCGCAT
GGTGAGTACG TTAAGGCTAA GGAAACCGTG AGTAAAATGG ATGGTGTTGG ATTAACGGTG
TTCAGGCTTT CTAGGCAACA TGCAGGTGAC TTAACCTATA GGGTTGGGTT AATTGCTGCT
GACCCAGACC ACATAGCCTC AGTGTCGGGT ATTGATGATA AGGCGATTAG AATTAGGGAA
GCCTTCTCAC TGGCTCACCG CTGCGTTAAG TTAGCCGCCA AGGCATACGG TGACTCTAAG
TTAGCCACAT TAAGGAACAT GGAGAGGATA CTGGCTCAAG TAGCCTCAGG GAGGAGAATA
CAAGTGGGTA TGCTGCAGAA CCTATTCGGA ACCAAGTACC CCACAGGTAA CTTGAATGAT
AATAAGTACT TCAGGAGGCT TACCGTAGTC TTATCTGAGC TTAATGACTT AGCCAGTGAA
TCAGCTGGCC GGCATGCTGC CTTAGCGGCT AAGAGGTATG TTAGGAAGCT TAGGAGACTT
GGGGTTTACT CACCATTAAG TACACGCCTA CTTAAATTAC TTAAGGCTAG GCACGCCTCA
GTAATTAACC TAGCTGGCCT AGATGACTCG GTTCAGGACC ATGTGGCGTA TAGTATACTC
AGTAGGGTTC TTAAGGCTAG GATAAACTAC GTGAGGAGGT TACCGGGCCC TAAGTACCCT
TACCCAGTGG TTATTGTTGT TGAGGAGGCT CACCGTTTTG CCCCAGGTAA TGGTAGGAGA
ACTTTAACGT ACGGCATACT CTCTAGGATA GCCATGGAGG GTAGGAAGTT CGGAGTCTTC
CTAGTGTTAA TAACCCAGAG GCCATCTAAG ATTGATCAAG ATATATTGAG TCAAGTCCAG
AATTACGCAT TACTCAGGGT GGTGAATCCT AAGGATAGGG AGGCGTTACT TGAGGCTGGG
GAGTTAATGA ACAGTAACCT GGATAAGATA CTTGCATCAT TGAATATTGG CGAGGCATTA
ATAATGGGTC CAATAGTTGG TGGTCAAGTA CCAATAGTTG TGAAGCTTAG GAATAGGGTG
CTTGAGTACG GTGGAGGTGA CATAAACCTG GACAAGTACT GGGGTGTTAA GGATGAGGAT
TATGAGAATG AGGTGAGTAG GATGATGGGC TTAAAGATAC CTAAGTTAAC CATAGAGAGA
GCTAAGCTAC TCCTGGATAA GATAAGTGAT GAATCATTAA GCGACTCAGT AATCAGGGGG
TACGTTAATG GGGCTAGGGT TGAGGTTGAT TTAAAGAATG AAGTTTGGAG CTGCAGTAAA
TGCAGGAACT CAATGAAACC CTGTGAACAC GTGGTGGCTC TACTGCTTAA GAAGGCCATG
AGGGAGGCTG AATTAATGCA TAAGTAA
 
Protein sequence
MEPVGYVIGN NGVDELIMIA NPRYADVIKL FDYVYYEHGD SRILAQVTGI NRELYRVSDS 
LAPVVFNDGV KPVETVLVKL LIIGKKTGDL LKLPEAPPPV STPVYQADPE LVKSYLGLRG
RLCIGYLASM QDVKVCLNEK AISRHMAIIG ATGNGKTWLS VLVIEELLKL GATVLILDPH
GEYVKAKETV SKMDGVGLTV FRLSRQHAGD LTYRVGLIAA DPDHIASVSG IDDKAIRIRE
AFSLAHRCVK LAAKAYGDSK LATLRNMERI LAQVASGRRI QVGMLQNLFG TKYPTGNLND
NKYFRRLTVV LSELNDLASE SAGRHAALAA KRYVRKLRRL GVYSPLSTRL LKLLKARHAS
VINLAGLDDS VQDHVAYSIL SRVLKARINY VRRLPGPKYP YPVVIVVEEA HRFAPGNGRR
TLTYGILSRI AMEGRKFGVF LVLITQRPSK IDQDILSQVQ NYALLRVVNP KDREALLEAG
ELMNSNLDKI LASLNIGEAL IMGPIVGGQV PIVVKLRNRV LEYGGGDINL DKYWGVKDED
YENEVSRMMG LKIPKLTIER AKLLLDKISD ESLSDSVIRG YVNGARVEVD LKNEVWSCSK
CRNSMKPCEH VVALLLKKAM REAELMHK