Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1609 |
Symbol | |
ID | 5708660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 1680865 |
End bp | 1682097 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641276117 |
Product | major facilitator transporter |
Protein accession | YP_001541422 |
Protein GI | 159042170 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.655483 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGATA GAAGAGATTT GATACTTATT TTATCATCCA GGGTTCTTAG AAGTATTGCT ACGGGTGCTC TTGGTGTCAC CACGGGGCTT TACCTATATA ATGTGCTTCA CCTATCAGCC ACCTTAATAG GCGTATTCTT TGGTGTTGGT GCCTTCGCAA CACCTTTAAT GAGCCTATAC TTCGGTAGGC TTGGTGACTG TTATGGTAGG AAGAGGATGC TATTAATAGC ATTACTATTC CTACCAGCTG CAACAGCAAT ACTACTATTA ACCTCAAACT ACGCCCTACT ACTAGTTGCA GCGGCATTAG GTGGATTCGG TACTGCTGGG GCTTTAGCCA GTGGTAGTGT TGGGGCTATT GTTGCCCCAA TGATGACTGC ATTATTGGCT GATAAGACTA ATGAGGAGAA TAGAACCATG GTGTATTCAC TACTTAACCT AGCCTCAGGT CTAGCTGGGG CGGTGGGTGC ATTATTGGCT CACTTAAGTT ACAGGGAGGG CTTCATGATT GCCCTAGGGC TTTCAACGGC ATCATTCCTA GCAATACTGC CCGTTAGGGA TAGGTACAGT GAGAGTGCGG TTAAGGGTAG GTGCGGTTCA GTTAACGGTA GGTTGGATGA GAAGGACAGG AGGGTTATTA GGAGGTTCGT ATTGACTGGT GCCTTTAATG GTATTGGACA GGGCTTAGTG ACACCATTCC TACCCATAAT CTTTGAAATA CTCCTCAAGA TACCTAAGGG TGAGATAGGG AATATCTTCT TCCTGGGTGG CGTGGCTGCT GCATTAATAT CACTGCTAAC GCCAGTCATA ACCAGTAGGC TCGGCTTCGT TAGGACTGTT GTTTTAACCA GGTCAATATC CACTGCGGCC TTAGTAACAT TACCCTTCGT AAATCGCTTT TCCCCGGTGT TGAGTTATGA TGTGGCCATA GCCATGGTAG CCTACTTAAT TTACGTAATG TTCAGGGTAG TATCCCTACC TGCTCAGTCA GCTTTAATGA TGAGTCTAGT TAGTCAGGGT TCAAGATCAA CCACTGCCGG TGCTAATCAA GCGGCTAGGT TGCTTCCATC AGCGGCGGCG ACATTATCCA GTGGAGCCAT GATTGATTAC GTAGCCTTAC CTGTCCCATT TATAATCGCT GTGATTATTA ATGGAGTTAA CATATACCTG TATACAAGGT TCTTTAAAGA TGTTAGGACA GGCCGTGGTG TAAGAAGTAT AATAGTTGAG TAA
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Protein sequence | MSDRRDLILI LSSRVLRSIA TGALGVTTGL YLYNVLHLSA TLIGVFFGVG AFATPLMSLY FGRLGDCYGR KRMLLIALLF LPAATAILLL TSNYALLLVA AALGGFGTAG ALASGSVGAI VAPMMTALLA DKTNEENRTM VYSLLNLASG LAGAVGALLA HLSYREGFMI ALGLSTASFL AILPVRDRYS ESAVKGRCGS VNGRLDEKDR RVIRRFVLTG AFNGIGQGLV TPFLPIIFEI LLKIPKGEIG NIFFLGGVAA ALISLLTPVI TSRLGFVRTV VLTRSISTAA LVTLPFVNRF SPVLSYDVAI AMVAYLIYVM FRVVSLPAQS ALMMSLVSQG SRSTTAGANQ AARLLPSAAA TLSSGAMIDY VALPVPFIIA VIINGVNIYL YTRFFKDVRT GRGVRSIIVE
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