| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1606 |
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| Symbol | |
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| ID | 5710110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 1678015 |
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| End bp | 1678704 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641276114 |
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| Product | bacterio-opsin activator |
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| Protein accession | YP_001541419 |
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| Protein GI | 159042167 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3413] Predicted DNA binding protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.732859 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTAATG TAATTCATGT GGTATTGAAT CATTACGGGG ATTGGACTGA GTTAACTGAG
AAGTATGATG TGGTAATTGA TAATCCCTAC TACGTACCGG TTCAATCAAT GGGTATTAAC
TTTGAATTAT TTAGAATCCA TGAGAGGTAT GGTTCATATG TTAAGGAATT AATAAATAGG
ATTAGGAATC ATGGAAGTAC AATAGTTAAG GTTATTAATG TAATCCCAAA TAGGGAATAT
ACGGATGCCG TAATGTACGG TGACTATAGT AAGAGCGTTA AATCCATTTT CGTTAATAAC
ATGTTCATAA TAAGTTACTC AAGCTTTAAA TATGGTTTAG AGTATTATAC AGCAATACTA
CCACCCATTA AAGCCTCTGT AAACAAGACA TTATCAGAAT TAAAGAGCCA ACTTAAGGAG
AAGGCCGACG TTATATCCTT TAAGCAAGAG CGAGCTAAGC AATTACCTGT TAAGATCATT
ACGGAATTAA CACCAATGGA GAGGGATGTA ATTAATACGG CGTATGAGTT AGGCTTCTTC
AATTACCCGC GTGGTGCTAA CCTTGATGAT GTAGCTAAGG AGTTGAAGCT CTCCAAGGCC
ACAGTGGATT ATCACTTGAG GAATGCGATA AGGAAAATAA TCTCAAGTTA CTTAATGAAG
AAGGAGAAAT TATGCTGGGA GCAGTATTAA
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| Protein sequence | MINVIHVVLN HYGDWTELTE KYDVVIDNPY YVPVQSMGIN FELFRIHERY GSYVKELINR
IRNHGSTIVK VINVIPNREY TDAVMYGDYS KSVKSIFVNN MFIISYSSFK YGLEYYTAIL
PPIKASVNKT LSELKSQLKE KADVISFKQE RAKQLPVKII TELTPMERDV INTAYELGFF
NYPRGANLDD VAKELKLSKA TVDYHLRNAI RKIISSYLMK KEKLCWEQY
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