Gene Cmaq_1605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1605 
Symbol 
ID5710109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1676756 
End bp1677856 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content44% 
IMG OID641276113 
Productpeptidase M24 
Protein accessionYP_001541418 
Protein GI159042166 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0006] Xaa-Pro aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGGTTG GTCGATTCGC CAATAGGCTT AGGGCATTCA TGAATAATGC CAGGGGCCTT 
GGGGTTGAAT TAGCGGTGGT CTCTACCCCA GTTAACATTA GGTACTTAAC GGGTGCTCGT
ATTGAAACCT TTGAGAGGTT TGGTGCCTTA CTAATATGTC TACGTAACGG GGAGTCTACA
TTAATAATAC CTAAGCTTGA TGAGGGGAAG GTTAAGGAAC TTGATTTAAA CTACTTAACC
TACACTGACT CAGAGGGGCC TAGGGCACTT GTTGAGAGGG TTACTTCAAA CTGCGGTAAT
GCCACTGTGG TTGGTTTTGA ATCCAATGCA CCCCTGAGGC ATTTTTGGTT GCTTAGAAGC
GTACTAGGTG GCTTTAAGGA TTTGCCGATT GATGATGCAT TAGTAAGCCT CAGGATTATG
AAGGATGAGG AGGAGATTAG TAATATTAAG GCTGCTGTTA AGGCAATTGA GAAGGGGTTT
GAGGCTGTGG AGAATTCATT AAGGGCCGGG TTAACTGAGG TTAAGCTGGC TGAGGTAATA
AGAGACGTCA TCTCCAGTGC TGGTGCTGAG CCAAGGGATA TACTTGTTCA ATCAGGTCCA
AATTCAGCAA TACCTCATTG GCTACCCAGC AGTAGACGCA TTAGTGATAA TGATGTCGTG
GTTATTGACT TAACGGCAAC ATACAATGAC TATTACGGTG ACTTAACGAG AACATTCACC
GTGGGTAATG TTAATGATGA GTTCATAAAA ATCTATAACC TAGTTAAAAG AGCCCACGAT
GAAGCAATAA CCGCGGTTAA GGATGGTGTC ACTGGATCGT ATATTGACTC AGTGGCTAGG
CGTATAATAA GGGAGGGGGG TTATGGTGAA TACTTCATAC ATAGGACTGG TCATGGAATC
GGGCTTGAGG TGCATGAGGA ACCATACATA AGTAGTGATT ATGTTAAGGC ATTACCCAGA
GGCTCAGTGT TCACCATAGA ACCAGGCATA TATCTTCAGG GTAGGTTTGG TGTAAGGCTT
GAAAGTAATG TGGTAATAAA TAGTAATGGT GTTGTGGAGG TCCTTGACTC ATACTGGCCA
AGCATTAATC ATGCTGATTA A
 
Protein sequence
MGVGRFANRL RAFMNNARGL GVELAVVSTP VNIRYLTGAR IETFERFGAL LICLRNGEST 
LIIPKLDEGK VKELDLNYLT YTDSEGPRAL VERVTSNCGN ATVVGFESNA PLRHFWLLRS
VLGGFKDLPI DDALVSLRIM KDEEEISNIK AAVKAIEKGF EAVENSLRAG LTEVKLAEVI
RDVISSAGAE PRDILVQSGP NSAIPHWLPS SRRISDNDVV VIDLTATYND YYGDLTRTFT
VGNVNDEFIK IYNLVKRAHD EAITAVKDGV TGSYIDSVAR RIIREGGYGE YFIHRTGHGI
GLEVHEEPYI SSDYVKALPR GSVFTIEPGI YLQGRFGVRL ESNVVINSNG VVEVLDSYWP
SINHAD