Gene Cmaq_1604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1604 
Symbol 
ID5710108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1675325 
End bp1676686 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content44% 
IMG OID641276112 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_001541417 
Protein GI159042165 
COG category[R] General function prediction only 
COG ID[COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.90529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCATT TTTATAAACC ACACGTAATA CTCATGGTAA TGCGAGTAGT AGTGATTGGT 
GGTGGAGCCG CCGGTATGAG TGCAGCATCA AGGATTAAGA GAATTAGACC TGACTACGAC
GTGGTGGTTT TTGAGTCAAC TAACATAGTT AGTCACGCCC CATGTGGTAT ACCCTACTTC
CTGGAGGGTC TTTTCAATGA TGAATCACTC TTCATGCATT ACACACCCGA CTACTTCACT
AGTGTTAGGG GTGTTAGGGT GAGGGTTAAT GAGAGTGTTG TTAAAGTGGG TGATGGATTC
ATTATTACTA ATACTGGTAA TCGCGTGAAT TGGGATTACT TAGTGTTAGC CACAGGATCA
GTACCAAGGA TCCCAAACAT ACCCATTAGC GGTAATAAAG TATTCACAAT ACACCACCCC
TCCAGGGCCG TGGAGGTTAG GAGAATTCTT GATTCGGTTA ATGTTATTGG TATTGTTGGT
TCAGGTTACA TTGGGCTTGA GGTTGCTGAG GCAATGAGGG TTAAGGGTAA GGAGGTTATT
ATTGTGAGTA GATCAAGTTA CCCATTAAGT AGGTCACTGG ATAGTGACTT AGGTGCATTA
GTTACTGAGG AATTGATTAA AAGTGGGGTT AAGGTTAAGC TGAATGAGAG ACTTATTGAA
ATAGGCAGGC AGGGTGATTC CCAGGTAATA ATCACTGATT CAGGTAAATA CATTGTTGAT
GCCGTTATTC TAGCCACAGG CATAGCACCT AATGTTGAAT TAGCCAGTAT GCTTAATTTA
AGGATTGGGG AAACCGGGGC CGTATGGGTT AATGAACACA TGGCTACGAG TAGGGAGAAT
GTTTACGCAG CCGGTGATGT TGCTGAGACT ATTAATGTGG TGACCAATGA ACCCTACTGG
CATCCATTCG GCACCACTGC TAATAAGATG GGTTACACTG CTGGTAGTAA TATAGCTGGC
TTAAGGTTAA GATTCCCTGG GGTAGCTGGT ACATCAATGA CTAGGTTTAT GAACATGTAC
GTGGCTTCAA CAGGCTTAAC TGAGAGTGAG GCTGTGAAGC ATGGTTTAAG AGTGGCCTCC
ACTGTGATAA GGGCTAGGAC GAGGGCTAGG TACTATCCAG GTGATGGGGA GCTTATCGTT
AAATTAATCG CTGAGAAGGG TTCAGGGAGG ATAATTGGTG GTCAATTCAT TGGTAGTGAT
GGTGGACAGG TACTTGGTAG GGTTAATACA TTAGCCTCAT TAATATATAA GAAGGCTACA
GTGGAGGATC TATTCCTAAC CGACCTAGCT TACCTTCCAC CTGTCACCCA GGTTTGGGAC
CCATTAATAA TAGCTGCGCG TCAATTATTC AATAAACTGT AA
 
Protein sequence
MNHFYKPHVI LMVMRVVVIG GGAAGMSAAS RIKRIRPDYD VVVFESTNIV SHAPCGIPYF 
LEGLFNDESL FMHYTPDYFT SVRGVRVRVN ESVVKVGDGF IITNTGNRVN WDYLVLATGS
VPRIPNIPIS GNKVFTIHHP SRAVEVRRIL DSVNVIGIVG SGYIGLEVAE AMRVKGKEVI
IVSRSSYPLS RSLDSDLGAL VTEELIKSGV KVKLNERLIE IGRQGDSQVI ITDSGKYIVD
AVILATGIAP NVELASMLNL RIGETGAVWV NEHMATSREN VYAAGDVAET INVVTNEPYW
HPFGTTANKM GYTAGSNIAG LRLRFPGVAG TSMTRFMNMY VASTGLTESE AVKHGLRVAS
TVIRARTRAR YYPGDGELIV KLIAEKGSGR IIGGQFIGSD GGQVLGRVNT LASLIYKKAT
VEDLFLTDLA YLPPVTQVWD PLIIAARQLF NKL