| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1589 |
|---|
| Symbol | |
|---|
| ID | 5709473 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | + |
|---|
| Start bp | 1659062 |
|---|
| End bp | 1663015 |
|---|
| Gene Length | 3954 bp |
|---|
| Protein Length | 1317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641276097 |
|---|
| Product | peptidase S53 propeptide |
|---|
| Protein accession | YP_001541402 |
|---|
| Protein GI | 159042150 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4934] Predicted protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.519318 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCGTG TAAATGGGTT AACGGTAGCA TACTTAGTCT TAACCCTTAT TATAATTTAC
GTTGGGATTT CATTAATTGC TCATGGTTCA TTAATTAATA TGCAAACGAA TAGCTTACCC
CCATCATTAA GCGGCTACTC ATACACTGGT TCACTCAGTA ATAATACTAA CGTTATAGTA
ACGATATATG TTCCACTTAG GAACCTGAAC CTACTTTACC ACTACGTTGA ATTAATATCA
AGCCCAGGTT CACCAATGTA TCATCACTTT CTAAGTAAGG CTCAAGTTGC CTCACTATTC
TATCCAATTA ATGAATACAA TAATGTTACC GCCTTCCTCA AGGAACACGG CTTCAGAATA
TTATTCACTG CAGCTGACTC CATAATAGTG GCTGAGGGTA ACGTTAGTGC TGTTGAAAGA
TACCTAGGTT TAAGGTACGC CGTCTACAGT AATGGTTCGG TAAGCTTCTA TGAGTCCTAT
GGGGAGCCTA AGCTAGGTAA CGTGATGATT TACTCATCTA ACATAACCAT GCTTCTACTT
GAGCATCCAT CATTCTTAGT AACAGGCAGT GAATTAAATG GGTTAAGGAA TTACGTTAAG
AGTAGTGTTA ATTTAACTTA CCCTATTGAG GCTTATTGGC CCACGATGCT TCAGGGGGCC
TACAATGCAA CCGCATTATA TGAAATGGGG TATTATGGTC AAAACTACAC GATAGGCATT
ATTGACTTCT TCGGCGACCC CTATATTGTT AATCAATTAA CGCAGTTTGA TTATGAGACA
GGCTTACCTA ATCCACCAAG CTTCAATATA ATACCCATAG GCCCCTATAA CCCTAATCTA
GGTGTTTATA ATGGTTGGGC ATACGAGATA AGCCTTGATG TTGAGGCTGC CCATGCCATT
GCACCTGAGG CTGGCATAAC GCTTTACGTA GCTAACCCAG CATTACCCCT AGCTGCTATA
ATAGCTTACA TCGTTGACCA GGATAATGTT AATGTAGTGT CCCAGAGCTT CGGTTTCCCG
GAATCAATAC TCTCAACTGT TAATGGCCCA GTCTTCTACT TCAATGTCTT CCTAACCGAT
GAATACTACG CACTGGGTAG TGTTGAGGGT ATAACCTTCA CTGCGGCAAG TGGAGATGGG
GGTGGGGCGG GTTATAGTAA TGGACCTATT GGCGCCGTTA TTTACCCATC AACATCACCC
TACGTAACCG CCGTGGGTGG TACAACCACC TACATTCAAT TACCCAACGG CTCCTATTAC
CAGACAGCCT GGTCCAGTTA CGGCTTCATA CCGCTTGATG AGAATCTAGG TGGATCAACA
GGTGGTGTTA GTGCTGTTGA ACCTAAGCCG TGGTATCAAT GGGGAATTAC GACACCGAAC
TCATATCCCC TCGGCAGAAT GGTTCCCGAT GTTGCAATGG ATGCAAGCCC CTACCCAGGT
TTACTGATTG TGGGGCCTGG TAATACACTA CTTATAACAG GGGGTACAAG CGCCGCGGCG
CCTTTGCTTG CTGGATTATT AACATTAATA ATGGATTACG TTCACTCAAG CCTAGGCTTA
ATTAACCCTG CATTATACAG TATAGCCAAT AATACTAATG AGTATGGTAA GGCGATAGTA
CCAATCACTT TCGGCTACAA CATACCGTGG ACAGCCCACT ACGGTTACAA TATGGTAACT
GGGTTAGGAA CCATTAATGC CGGGTACTTC GCTGAAGCCC TCTCGGCATT AAGCAATCAA
AGTAAGGGTG GCTTATCAAT AACAGTTAAC GTATTCAACA GCTCCGGTTA CCCGCAGAGG
CAGTATTACC CAGGGGAGAG GATTATAATT AGTGCATCAA TAATTGCTAA CTCGACTCAA
CTGGTTACGT CAGGGAACTT CTCAGCCATA ATTGAGAATC CCTGGGGTAC CATAGCCATT
GTCCCATTAA GGTTCACTCA ACCCCTAGGT TGGGCAGCAT CAATTACACT TCCAAGTAAC
GCCTCAGGCA TATTAATGGT AACTGTTTAC GGCAAATACA GTAACCTTAC CGGCTACGGA
TTCACCACTG TGTTTTCGGG TTATTATGCT CAATTCCTTG AACCGCTCAC ATTCATACCA
CTGTACTCGA AGTTAGGTAT TTGGATTGAA GTTAATTTAA CCAATGCTTA CGGCTCATTA
CCAATTAACG TAACTAACCT AACAGCATTA GTGTACTACT ACGATTACAT TAATAACTCA
TACGTATTAA TAGGCAATGT CACATTAAGA CCACAGATAA CAAGTCAAGG CTTCGGTTTA
ACACCATTAT TCATAGGCAA GCTACCGAGT GATGCACCCA TGGGTAACCT ACTCATTAGG
TTAACTAACG CCTTCGGTTT CGTGGCATTT GTCAATGGCA TAATGATGCA GAGCATGAGT
GTCCTCCCAC CTATTGTTGC TCAACCAGGT TCAGTTGCAG CAGGAGGTGA CGTAATAGTG
GCGGGTTATC CTACTCCACC ACTTGACTTA GGTCAAGTCT CCGTTGGGAC TGGTACGTAT
GTGTTTTATA ATGTTCTCTA CGGCTCCAAC GTAACTGCCT CATTAATAGG ACCTAATGGT
GAGGTTATCA GTAGGGCAAA CATTTACTAT AATCCATCAG TGGGCGCCTA TTACGGTGTC
TTAAATGTGC CTCAAAATGC TGCACCAGGC CTATACCTAG TGGCCTTAAA TGCCTCATAT
GACTCATATA CGCTTAACTC CACGATAACA GGCTCATACT TCGCTGAAAT ATATGTTTCC
AGAGGTTACT CGACACCATT AATACGTTTT TCATCACTCT ACGCCACTGA GGGGCAGGTG
ATTACTATTT ACGCGAACAT AACTTATCCT AACGGTACTG AGGTTAAGTA CGGCATGTAC
TCGGCTGTCG TGTACCCTAT ATCATTATCA GGCATTTACC CGGCCTTAAG TCAATTATTC
GAAACCCCAC TCTGGTATAA TCCTAAGATC GGCTTATGGG TTGGTAATGT AACTTTACCA
TCTCAATTCT CTCTAGGTAG CTTAACCTAC CTTGAAGGTA ACATGTACTT CTCATCACCG
TATGGAGTAT TGATTACCGG TGTTTCAGCT GATGGATTCC CAACACCAAG TAGCCTACTA
ACTCAATCAA CATTCTACGT ACTACCATAC ACATTAGTGA GTGATCAGTT AATAAGTAAT
ATGAAGGCTT ATCACTTAGC GTTGATTAAT GATACGTTAG TGAATGGTGT GTATGTTGAT
GATGTTTTAA TTAATGATAC ATTAATCGGT AATGTTACGT TAATTAACTG CAACGCCAGT
AACATAACTA TACTTAACTC TAACGCCACA GTAATGCTGT CTAACATTAA TAACATTAAT
GCAGTTAATA GTACTATTAT GTTATTCACA AGCAAGGTCA ATGAATTATC GATAGCATCC
TCAAGGTACA TTAATGAAAA CTCAGTGGTG AAGCACATTT ATCCTCCACC ACCAGTTGTC
ATAATTAATT ACCCCAGTGG TGATGCTAAT TTAACAGGCT TAGTTGCTGT TAACTTCACT
GTAATGGGTG ATGATGTGTC AAACACGGTG CTTTACCTTA ATGGTCATGA ATTAGCCAGT
TACAGTGGTA ACGGTACATT CACCTACGCA TTAAATACGG GGAGTTACCC TGATGGTACA
TATGAATTAA CTGTTGTTGC ACTTCAGGCT GATGGATCAT CAGCATCAGC AACAGTGGTG
GTTAATATTG AGAATGGTTT ACTAACCCTT AATAATAGGC TTAATGCCGT TAATCAATTC
ATTAACAGTA GCGTTGCTAG GTTGTCTAAT GAATTATCAT CAAACATGAC GCTGATTTAC
AGTGAATTCA ATAGACTTAA CAGTAATCTA TTAATCATGG ATATTCTACT ACTGGTGGCC
CTTGCCTTAA GCTCAGCGGC CTTATCATGG TTCATAGCAT CTAGGCGTCA TTAA
|
|---|
| Protein sequence | MIRVNGLTVA YLVLTLIIIY VGISLIAHGS LINMQTNSLP PSLSGYSYTG SLSNNTNVIV
TIYVPLRNLN LLYHYVELIS SPGSPMYHHF LSKAQVASLF YPINEYNNVT AFLKEHGFRI
LFTAADSIIV AEGNVSAVER YLGLRYAVYS NGSVSFYESY GEPKLGNVMI YSSNITMLLL
EHPSFLVTGS ELNGLRNYVK SSVNLTYPIE AYWPTMLQGA YNATALYEMG YYGQNYTIGI
IDFFGDPYIV NQLTQFDYET GLPNPPSFNI IPIGPYNPNL GVYNGWAYEI SLDVEAAHAI
APEAGITLYV ANPALPLAAI IAYIVDQDNV NVVSQSFGFP ESILSTVNGP VFYFNVFLTD
EYYALGSVEG ITFTAASGDG GGAGYSNGPI GAVIYPSTSP YVTAVGGTTT YIQLPNGSYY
QTAWSSYGFI PLDENLGGST GGVSAVEPKP WYQWGITTPN SYPLGRMVPD VAMDASPYPG
LLIVGPGNTL LITGGTSAAA PLLAGLLTLI MDYVHSSLGL INPALYSIAN NTNEYGKAIV
PITFGYNIPW TAHYGYNMVT GLGTINAGYF AEALSALSNQ SKGGLSITVN VFNSSGYPQR
QYYPGERIII SASIIANSTQ LVTSGNFSAI IENPWGTIAI VPLRFTQPLG WAASITLPSN
ASGILMVTVY GKYSNLTGYG FTTVFSGYYA QFLEPLTFIP LYSKLGIWIE VNLTNAYGSL
PINVTNLTAL VYYYDYINNS YVLIGNVTLR PQITSQGFGL TPLFIGKLPS DAPMGNLLIR
LTNAFGFVAF VNGIMMQSMS VLPPIVAQPG SVAAGGDVIV AGYPTPPLDL GQVSVGTGTY
VFYNVLYGSN VTASLIGPNG EVISRANIYY NPSVGAYYGV LNVPQNAAPG LYLVALNASY
DSYTLNSTIT GSYFAEIYVS RGYSTPLIRF SSLYATEGQV ITIYANITYP NGTEVKYGMY
SAVVYPISLS GIYPALSQLF ETPLWYNPKI GLWVGNVTLP SQFSLGSLTY LEGNMYFSSP
YGVLITGVSA DGFPTPSSLL TQSTFYVLPY TLVSDQLISN MKAYHLALIN DTLVNGVYVD
DVLINDTLIG NVTLINCNAS NITILNSNAT VMLSNINNIN AVNSTIMLFT SKVNELSIAS
SRYINENSVV KHIYPPPPVV IINYPSGDAN LTGLVAVNFT VMGDDVSNTV LYLNGHELAS
YSGNGTFTYA LNTGSYPDGT YELTVVALQA DGSSASATVV VNIENGLLTL NNRLNAVNQF
INSSVARLSN ELSSNMTLIY SEFNRLNSNL LIMDILLLVA LALSSAALSW FIASRRH
|
|---|
| |