Gene Cmaq_1577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1577 
Symbol 
ID5709024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1650960 
End bp1651820 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content46% 
IMG OID641276085 
Product5'-methylthioadenosine phosphorylase II 
Protein accessionYP_001541390 
Protein GI159042138 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0005] Purine nucleoside phosphorylase 
TIGRFAM ID[TIGR01694] 5'-deoxy-5'-methylthioadenosine phosphorylase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00552276 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCTAA TTAAGATATC TGGTGAAGGC ATATCCTCAG GTGAAGTTAG TGAGAGTGAG 
CTTGGTGTAG GTAAACCCTA CGTTGCGGTA ATAGGTGGTT CAGGGCTATA TGACCCAGGT
ATATTTGAGG AGCCTGTGGA GGTTCAGTTG CATACCCCAT ATGGCTTACC CAGTGATAAT
GTGATAATAG GTAGAGTTAA GGGTGAGTGG GTTGCCTTCC TGCCTAGGCA TGGTCGTGGG
CATAGGTACC CACCTCATAA AATACCCTAT AGGGCTAATA TATGGGCTCT TAAGGCCCTG
GGGGCTAGGG TTATATTATC TATAAGTGCC GTGGGTAGTT TAAGGCAGGA TTACGCACCA
GGTGACTTCG TGGTTCCTGA CCAATTCGTG GACATGACTA AGAACAGGGA GTACACGTTC
TATGATGGAC CCAGGGTTTG TCATGTTCAA ATAGGCCTTG AACCATTCAG TAATGATTTA
AGGAGACTAA TCATTGAGTC TGCTTCAAAG TATAATAAGA CCCATGATTC AGGATGCTAC
GTATGCATTG AGGGGCCGAG GTTCAGTACT AAGGCTGAGT CGAGAATATG GAGGGATGTT
TATGGATGCG ATATAATAGG CATGACCCTT GTACCTGAGG TTAATCTGGC TAGGGAATTA
GGCATGTGTT ACGCCTTATT AGCCGTAATA ACTGACTACG ATATATGGGT CCCCCACCAG
CCAGTTACCG CTGAGCTTGT GGAGAAGACC ATGGGTGAGA AGCTTGATTT AGCTAAGAGG
GTTATGACTG AGGTAATACC TAGGATACCT AAGGATGTTC ACCTTAAGTG CCAGGAGACG
CTTAAAAATG CCTGCGTCTA G
 
Protein sequence
MRLIKISGEG ISSGEVSESE LGVGKPYVAV IGGSGLYDPG IFEEPVEVQL HTPYGLPSDN 
VIIGRVKGEW VAFLPRHGRG HRYPPHKIPY RANIWALKAL GARVILSISA VGSLRQDYAP
GDFVVPDQFV DMTKNREYTF YDGPRVCHVQ IGLEPFSNDL RRLIIESASK YNKTHDSGCY
VCIEGPRFST KAESRIWRDV YGCDIIGMTL VPEVNLAREL GMCYALLAVI TDYDIWVPHQ
PVTAELVEKT MGEKLDLAKR VMTEVIPRIP KDVHLKCQET LKNACV