Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1577 |
Symbol | |
ID | 5709024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 1650960 |
End bp | 1651820 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641276085 |
Product | 5'-methylthioadenosine phosphorylase II |
Protein accession | YP_001541390 |
Protein GI | 159042138 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0005] Purine nucleoside phosphorylase |
TIGRFAM ID | [TIGR01694] 5'-deoxy-5'-methylthioadenosine phosphorylase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00552276 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGCTAA TTAAGATATC TGGTGAAGGC ATATCCTCAG GTGAAGTTAG TGAGAGTGAG CTTGGTGTAG GTAAACCCTA CGTTGCGGTA ATAGGTGGTT CAGGGCTATA TGACCCAGGT ATATTTGAGG AGCCTGTGGA GGTTCAGTTG CATACCCCAT ATGGCTTACC CAGTGATAAT GTGATAATAG GTAGAGTTAA GGGTGAGTGG GTTGCCTTCC TGCCTAGGCA TGGTCGTGGG CATAGGTACC CACCTCATAA AATACCCTAT AGGGCTAATA TATGGGCTCT TAAGGCCCTG GGGGCTAGGG TTATATTATC TATAAGTGCC GTGGGTAGTT TAAGGCAGGA TTACGCACCA GGTGACTTCG TGGTTCCTGA CCAATTCGTG GACATGACTA AGAACAGGGA GTACACGTTC TATGATGGAC CCAGGGTTTG TCATGTTCAA ATAGGCCTTG AACCATTCAG TAATGATTTA AGGAGACTAA TCATTGAGTC TGCTTCAAAG TATAATAAGA CCCATGATTC AGGATGCTAC GTATGCATTG AGGGGCCGAG GTTCAGTACT AAGGCTGAGT CGAGAATATG GAGGGATGTT TATGGATGCG ATATAATAGG CATGACCCTT GTACCTGAGG TTAATCTGGC TAGGGAATTA GGCATGTGTT ACGCCTTATT AGCCGTAATA ACTGACTACG ATATATGGGT CCCCCACCAG CCAGTTACCG CTGAGCTTGT GGAGAAGACC ATGGGTGAGA AGCTTGATTT AGCTAAGAGG GTTATGACTG AGGTAATACC TAGGATACCT AAGGATGTTC ACCTTAAGTG CCAGGAGACG CTTAAAAATG CCTGCGTCTA G
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Protein sequence | MRLIKISGEG ISSGEVSESE LGVGKPYVAV IGGSGLYDPG IFEEPVEVQL HTPYGLPSDN VIIGRVKGEW VAFLPRHGRG HRYPPHKIPY RANIWALKAL GARVILSISA VGSLRQDYAP GDFVVPDQFV DMTKNREYTF YDGPRVCHVQ IGLEPFSNDL RRLIIESASK YNKTHDSGCY VCIEGPRFST KAESRIWRDV YGCDIIGMTL VPEVNLAREL GMCYALLAVI TDYDIWVPHQ PVTAELVEKT MGEKLDLAKR VMTEVIPRIP KDVHLKCQET LKNACV
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