Gene Cmaq_1570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1570 
Symbol 
ID5709583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1645640 
End bp1646485 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content41% 
IMG OID641276078 
Productundecaprenyl pyrophosphate phosphatase 
Protein accessionYP_001541383 
Protein GI159042131 
COG category[V] Defense mechanisms 
COG ID[COG1968] Uncharacterized bacitracin resistance protein 
TIGRFAM ID[TIGR00753] undecaprenyl-diphosphatase UppP 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTGA ACTACGTAAT CAACGGTATT ATTCTAGGTA TTGTGCAGGG CATTAGCGAA 
TGGTTACCCA TAAGTAGTAA GACTCAAATA ATGATGACAT CAATATACGC ACTGCACTTG
TCATTTAACC AAGCCTACGC GCTTGGATTA TTCCTTGAGG CCGGTACAGT ACTGGCTGCT
TTAATTTACT TTAGAAGGGA AGTATGGGGG ATATTGAAGG CCCTCGTCCT TAGGGGAAGT
AAGTATGATT ACATGATGCT TAAGTACATT GTAGTCATAA CCATTCTAAC TGGATTAGTC
GGTGTTCCAC TTTACCTAAC AATAGCTGAC TCAATTAGGG GTATTGGTAT TGGCTTACCC
ATGATTGCAT TAGGCCTAAT ACTAATCGCT GACTCAATAC TAATAGCGTT CTCAAGGCTC
AGGTACATGC CTAGGAAGAG CTTGAGTGAT TTAAGAATGT GGGAGGTTGC AGTAATAGGT
GTGGTTCAGG GCATTGCTGC ATTACCAGGG GTTAGTAGGT CTGGTGTAAC GGTATCGGCG
ATGCTTCTAC TAGGCCTTAA CCCTGAGGAT TCATTTAAAT TATCCTTCAT ATCAATGATA
CCTGCAGCAA TAGGAGCATC AATAGTCCCG GCACTATTAA CGAAGCACTT ATTCAGCACA
TTAATTACCG ATGTCAACAC CTACACTATT ATTACCGCAA TAGTGATTGC GGCATTAGTC
AGCATTGTGT TAATAGATGC CTTAATTAAG TTCGCCAGGG GGAGGCATGT AGTAGTATTA
ACAGCATTAC TGGGTGCCTT AGCCATATTA AGTGGTGTGT TAAGTATGGT AACTGGCTTA
GGTTAA
 
Protein sequence
MNLNYVINGI ILGIVQGISE WLPISSKTQI MMTSIYALHL SFNQAYALGL FLEAGTVLAA 
LIYFRREVWG ILKALVLRGS KYDYMMLKYI VVITILTGLV GVPLYLTIAD SIRGIGIGLP
MIALGLILIA DSILIAFSRL RYMPRKSLSD LRMWEVAVIG VVQGIAALPG VSRSGVTVSA
MLLLGLNPED SFKLSFISMI PAAIGASIVP ALLTKHLFST LITDVNTYTI ITAIVIAALV
SIVLIDALIK FARGRHVVVL TALLGALAIL SGVLSMVTGL G