Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1564 |
Symbol | |
ID | 5709632 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1642071 |
End bp | 1642586 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641276072 |
Product | hypothetical protein |
Protein accession | YP_001541377 |
Protein GI | 159042125 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0907787 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTGAGA AATTCGATAA ATACTATGAC TACTTCAGCA GTATGCATGG GGGAATTAGG ATTAGACCTA GGTCAATCAA CCTAGGATTA CTGAGGATTA ACCTAGGTGG TGGATCACTA GTGGAGTTAC GAACCGGAGG CAGGGGTATG GCTTCAAGGA TTAATGCCAC TGGGGTTATG GAGGGTGAGC ATGTTGAATT AGTGAATCCA CCTGAGGATG TTAGGGTTAT TAGGGGTAGT TTTGTTAAGG TTCAGAATGG TGACTTAGAG GCTGTTGAGG GTGAGGAAGT AGTCCTATAT AATGTTAATG TTAGTAGGGT TACTGGGAGG AGGGTAAAGA TAATGAATAG TGACGTTAAT CACATTGAGG CCGAGGATGC AACACTAATT AATACAGATG CTGGAGAAGT CATAGTATCA CGTGGCGAAT TCATAAACTG CGACATAGAT ACCCTTGAAT ACAGGGAATC ATATAAAGTC GTAAATACTG ATGTAAAGAA CCTGAGGAAG GCTTAG
|
Protein sequence | MAEKFDKYYD YFSSMHGGIR IRPRSINLGL LRINLGGGSL VELRTGGRGM ASRINATGVM EGEHVELVNP PEDVRVIRGS FVKVQNGDLE AVEGEEVVLY NVNVSRVTGR RVKIMNSDVN HIEAEDATLI NTDAGEVIVS RGEFINCDID TLEYRESYKV VNTDVKNLRK A
|
| |