Gene Cmaq_1564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1564 
Symbol 
ID5709632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1642071 
End bp1642586 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content42% 
IMG OID641276072 
Producthypothetical protein 
Protein accessionYP_001541377 
Protein GI159042125 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0907787 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGA AATTCGATAA ATACTATGAC TACTTCAGCA GTATGCATGG GGGAATTAGG 
ATTAGACCTA GGTCAATCAA CCTAGGATTA CTGAGGATTA ACCTAGGTGG TGGATCACTA
GTGGAGTTAC GAACCGGAGG CAGGGGTATG GCTTCAAGGA TTAATGCCAC TGGGGTTATG
GAGGGTGAGC ATGTTGAATT AGTGAATCCA CCTGAGGATG TTAGGGTTAT TAGGGGTAGT
TTTGTTAAGG TTCAGAATGG TGACTTAGAG GCTGTTGAGG GTGAGGAAGT AGTCCTATAT
AATGTTAATG TTAGTAGGGT TACTGGGAGG AGGGTAAAGA TAATGAATAG TGACGTTAAT
CACATTGAGG CCGAGGATGC AACACTAATT AATACAGATG CTGGAGAAGT CATAGTATCA
CGTGGCGAAT TCATAAACTG CGACATAGAT ACCCTTGAAT ACAGGGAATC ATATAAAGTC
GTAAATACTG ATGTAAAGAA CCTGAGGAAG GCTTAG
 
Protein sequence
MAEKFDKYYD YFSSMHGGIR IRPRSINLGL LRINLGGGSL VELRTGGRGM ASRINATGVM 
EGEHVELVNP PEDVRVIRGS FVKVQNGDLE AVEGEEVVLY NVNVSRVTGR RVKIMNSDVN
HIEAEDATLI NTDAGEVIVS RGEFINCDID TLEYRESYKV VNTDVKNLRK A