Gene Cmaq_1561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1561 
Symbol 
ID5709908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1641315 
End bp1641617 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content50% 
IMG OID641276069 
Productregulatory protein ArsR 
Protein accessionYP_001541374 
Protein GI159042122 
COG category[K] Transcription 
COG ID[COG1777] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.442352 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATTCCC CAGAGGACTT GGTGAGGATT GGGAGAGCCT TATCAAACCC CCTGAGGGTT 
CGGATACTGT TAATGCTAGT GAAGAATCCA ACCTTCATAC AGGATATTGC CCAAAGCCTA
CACATACCCT ACGCCCTAGC TCACATGCAT TTGAAAATAC TGGAGGAGTC AGGCCTAATA
GAGGGCTCCT ACGTAGTGGA GGAGGAGCCG AGGCCCCATT TAAGGAAGGT GTACAGGGTG
AGGGACTTCA GGTTAATAAT AGACAAGCAG CTGCTAGAGC AATTGGCGGG TTCATCCAAG
TGA
 
Protein sequence
MNSPEDLVRI GRALSNPLRV RILLMLVKNP TFIQDIAQSL HIPYALAHMH LKILEESGLI 
EGSYVVEEEP RPHLRKVYRV RDFRLIIDKQ LLEQLAGSSK