| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1558 |
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| Symbol | |
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| ID | 5709905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 1637638 |
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| End bp | 1639515 |
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| Gene Length | 1878 bp |
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| Protein Length | 625 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641276066 |
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| Product | glutamyl-tRNA(Gln) amidotransferase subunit E |
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| Protein accession | YP_001541371 |
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| Protein GI | 159042119 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2511] Archaeal Glu-tRNAGln amidotransferase subunit E (contains GAD domain) |
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| TIGRFAM ID | [TIGR00134] glutamyl-tRNA(Gln) amidotransferase, subunit E |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.791103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTTAAAC TTGACTATAG GGCGCTTGGA CTTAAGGTGG GTTTAGAGAT ACATATTCAA
TTGGATACTG GGAGGAAACT GTTCTGCCAC TGTAAACCGG AGTTGAAGAA TACTGAGCCG
GATTTCAGGA TAATTAGGAG GCTTAGACCA GCAATGAGTG AGTTGAGTTC CATTGACCCA
GCCGCCTTAT GGGAGTTCAG GAAGATGAAG ACTATGATGT ATGAGGGTTT TAATGACGTT
ACCTGCCTCG TGGAGTTGGA TGAGGAGCCA CCCCATGAGC CTGACGAGGA GTCCCTGCTC
CTAGCCTTAG CTGTTTCAAA GGTGTTTAAC GCTAAGGTGT TTGATGAAGT GTACGTTATG
AGGAAGGTTG TTATTGATGG ATCCAATGTG TCGGGTTTCC AAAGGACCAT GGTTATTGCT
CATGATGGTT TAGCTGAATT CCTAAACTAC AAGGTACCCA TATGGACAAT ATCCCTTGAG
GAGGATGCAG CCAGGAGAAT TGAGGATAAG GGTGACGTGA CTGTGTATAG GTTAGATAGG
TTAGGTATAC CTTTAATTGA GGTTTCCACA GGACCTATGG AGTACCCGCC TAATTCAATA
ATGGAGGTTG CTTGGTTAAT AGGGAGGACT ATCATGAACA CTAGGCGCAC TAAGAGGGGG
CTTGGGGCTA TTAGGCAGGA CTTAAACATA TCCATTGCCA AGGGGGCTAA AACAGAGGTT
AAGGGTGTAC CGGAATTATC ACTAATACCT AAGGTTATTG AGTATGAGGC CCTTAGGCAA
GTTAACCTAC TTAAGATTAA GGATGAGTTA AACAACAGGG GCTTATCAAG GGAATCCTAC
ACACCCGACC TCATTGATGT AACAAGTGTT TTCTCATCAA CTAAGTCAAG TATAGTTAAG
AGAACGATTA ACGAGGGGGG AATAGTGGCT GCACTTAAAG CCCCTGGGTT AAGGGGGATA
CTTGGCTTTG AACTTCAACC TGGAAGAAGA TTCGGAAGTG AGCTAGCTGA TAGGGTTAGG
GCCTGGACTA GATTGGGTGG GTTAATGCAT AGTGATGAGT TACCTGGGTA TGGGATAAGT
AAGGAGGAGG TGGCGGCGGT GGCTAGTAGG CTTGGGGTTG ATTCATTCAT ACTCCTAATG
GGTCCACAGG GTGTTGAACT ACAGGAGGCT GCTAAGGTTA TTGTGGATAG GATTAAGGAG
GCATTCGACG GCGTGCCTGA GGAGACTAGG GCGGCTAAGG AGGATGGTAC AACGTACTTC
ATGAGGCCTA GACCCGGTGC AGCTAGAATG TATCCTGAAA CTGACCTTAG GCCCATTAGG
ATTACCTTCG AGCTCCTGGC TAAGGCTGAT AAGTATGTTC CTGAACCCAT AGATAAGCAG
ATTGAACGCT ACACCTCAAT GGGTATGAGC AGGGAGTTGG CTAGGCAATT GGCATCATCC
GAGTACTCCA TTGAGGCTGA GGAGTTGATT AAGAAGTATG AGGATAAGGT TAACCCAACC
CTCGTGGCGT CAATATTCGT TAACATGATT GGAGGCATGG GTAAGAACAT TGAGCAACTC
AACATAATTC AAGTTGTTGA TAAACTCCTT GAACTCTACG TTAACGGTAG GGTAACTAGG
GAGGCTATTC AGGATACTAT TCAGAAGTAC GTGGAGGAGG GTGGGAGGAG GGGTGTTGAG
GATATTATTA ATGAGGGGGG CTTATGGAGA ATGCAGTATA GTGAGGTCGC CTCAATAGTT
AAATCATTGA TTAATAATGG TGTTAAGGAT AAGGGTAAGT TAATGTCCAT CATAATGAGG
GATTATAGGG GTAGGGTGGA TTCACGTGAT GTTGAGAAGG CTATTAATGA ATTCCTAAGC
AGTGAACAGA AATCCTAG
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| Protein sequence | MVKLDYRALG LKVGLEIHIQ LDTGRKLFCH CKPELKNTEP DFRIIRRLRP AMSELSSIDP
AALWEFRKMK TMMYEGFNDV TCLVELDEEP PHEPDEESLL LALAVSKVFN AKVFDEVYVM
RKVVIDGSNV SGFQRTMVIA HDGLAEFLNY KVPIWTISLE EDAARRIEDK GDVTVYRLDR
LGIPLIEVST GPMEYPPNSI MEVAWLIGRT IMNTRRTKRG LGAIRQDLNI SIAKGAKTEV
KGVPELSLIP KVIEYEALRQ VNLLKIKDEL NNRGLSRESY TPDLIDVTSV FSSTKSSIVK
RTINEGGIVA ALKAPGLRGI LGFELQPGRR FGSELADRVR AWTRLGGLMH SDELPGYGIS
KEEVAAVASR LGVDSFILLM GPQGVELQEA AKVIVDRIKE AFDGVPEETR AAKEDGTTYF
MRPRPGAARM YPETDLRPIR ITFELLAKAD KYVPEPIDKQ IERYTSMGMS RELARQLASS
EYSIEAEELI KKYEDKVNPT LVASIFVNMI GGMGKNIEQL NIIQVVDKLL ELYVNGRVTR
EAIQDTIQKY VEEGGRRGVE DIINEGGLWR MQYSEVASIV KSLINNGVKD KGKLMSIIMR
DYRGRVDSRD VEKAINEFLS SEQKS
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