| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1542 |
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| Symbol | |
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| ID | 5709958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 1623140 |
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| End bp | 1624420 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641276050 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001541355 |
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| Protein GI | 159042103 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.141245 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGTCAG GATACAGTAA TATACAGGTA GTGTTTAATT GGCGTAATGT AATCGGTTCC
ATGCTTGGTT GGGGAATGGA TGCTTACGAC TTTGTTGCAT ACGATTTTGT GGCACCGGTT
ATAAAGGATT TATTCTTCGG TCAATTAGGC AGCTTAGGAT CCATGCTAGC GACACTGGCA
GTATTCAGCT TATCTCTAGT CGTTAGGCCA CTTGGTGGCG TATTCTTCGG TAATTTATCT
GATAAAATAG GTAGGCGTTA TGTACTTTAC GTAACCATGT TAGGTGCAGG AATATCCAGT
TTCTTAATGG GCTTTCTACC AACTTATGCT CAAGCCGGGT TAACCGCAAT AATACTTCTT
CTCCTTTTAA GGTTCGCGGT GGGCTTTTTC CTTGGTGGGG AATACTCATC AAGCGGTATT
ATGAGCGTGG AGAGTGTTAC TAAGTGGAGG GGGCTCGCCA GTGGCATTAT GCAGGCTGGT
TTTGATATAG GTATCTTCGG GGTCACCTTT ACATACACTA TTGTTGCAAC ATACCTACCC
AGTAGCGCAA TGAGCACCAT AGGTTGGAGG ATCGTATTCT GGAGCGGCAT AGTAACAACC
ATATTAGCCT TCATATTTAG AAGAAGGTTC CTAACGGAAT CCCCTGAATG GGAGAAGGCG
GAGAAGGTTA AGAGTCCATA TAAGGTTCTA TTTAAGAATT ATTGGTTACC AATGTTAACC
ATTCTTCTAG CAACAATGGG ATTCCTCTAC GAGTACTATG TTATGCTTGA GTTATCACCA
TTTATACTTC AGAGCGTTCT AAGTTACTCA GCTGCATTAT CCGGGTTAAT ACTAACAGTG
CTTTCAGCTA GTGACGCAGC AGGTAGTGTG TTTGGTGGTG TGCTTGTGGA TTTACTGAGA
AGCTCCAGGA GAGCCTTATT AGTAACATCA TTAATAATCC TAGTACTAAT ATATCCAACA
ATGTATGGGG TATTAATTAA TGGTAATGGC TGGCTTGTAC TACTCTGGGA TTTCCTAGCC
GTGCTACCAG TCGGGGTTAT GCAGGTTTAT ATTAGGGATC TTTTACCAGT TAACGTTAGA
TCCACAGGGG CTGGTTTAGG TTATAATGGT GGAACCTGGT TAGCTGCCTG GGCAGCATTA
ATAGCTACAT TAATGGCCTC AGCATCAACT AAGCCTCAAC CATGGTTATC ATCAATAACA
ATTAATACAT TAATAGGAGC AGTATTAATG ATAATTAGCT TCATCCTAGC GGCTAAGGCA
ATTAAATCAC ATTCACAATG A
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| Protein sequence | MGSGYSNIQV VFNWRNVIGS MLGWGMDAYD FVAYDFVAPV IKDLFFGQLG SLGSMLATLA
VFSLSLVVRP LGGVFFGNLS DKIGRRYVLY VTMLGAGISS FLMGFLPTYA QAGLTAIILL
LLLRFAVGFF LGGEYSSSGI MSVESVTKWR GLASGIMQAG FDIGIFGVTF TYTIVATYLP
SSAMSTIGWR IVFWSGIVTT ILAFIFRRRF LTESPEWEKA EKVKSPYKVL FKNYWLPMLT
ILLATMGFLY EYYVMLELSP FILQSVLSYS AALSGLILTV LSASDAAGSV FGGVLVDLLR
SSRRALLVTS LIILVLIYPT MYGVLINGNG WLVLLWDFLA VLPVGVMQVY IRDLLPVNVR
STGAGLGYNG GTWLAAWAAL IATLMASAST KPQPWLSSIT INTLIGAVLM IISFILAAKA
IKSHSQ
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