Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1529 |
Symbol | |
ID | 5709196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1612667 |
End bp | 1612906 |
Gene Length | 240 bp |
Protein Length | 79 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641276037 |
Product | like-Sm ribonucleoprotein core |
Protein accession | YP_001541342 |
Protein GI | 159042090 |
COG category | [K] Transcription |
COG ID | [COG1958] Small nuclear ribonucleoprotein (snRNP) homolog |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAGTA GGTGTATGAA GTTCGTTCAA GACGAGTTAA GCTCAGTGGT GGGAAGCACG GTGCTGGTTA AGTTAAGGGA TGGTACAACC ATAAGGGGTA CCTTGAAGAA CTATGACCAG CACATGAATC TACTGCTGGA TGACACAGAG GAGATAATAG ACCCTAAGAC ATCCATTAAG AGGGGTATGG TTGTGATAAG AGGGGACACT GTTCTCTTCG TATCGCCAAT AACAACATAG
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Protein sequence | MASRCMKFVQ DELSSVVGST VLVKLRDGTT IRGTLKNYDQ HMNLLLDDTE EIIDPKTSIK RGMVVIRGDT VLFVSPITT
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