| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1513 |
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| Symbol | |
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| ID | 5709362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 1594872 |
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| End bp | 1595612 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641276022 |
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| Product | CRISPR-associated protein APE2256 family |
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| Protein accession | YP_001541327 |
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| Protein GI | 159042075 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4006] Uncharacterized protein conserved in archaea |
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| TIGRFAM ID | [TIGR02619] putative CRISPR-associated protein, APE2256 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00403065 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGTTATT TTCTTGGTAT TACTGTGGGG GTTTCGTTGT TGAGGAATGC GTTGAGTAGT
GATGCTCTTG GGGATTACTC TGGGGTTGTG GGTCGTGTTC TTCAGGGTTC TGAGGATTCT
GCCTACGTGT TGTTTAATGA TGATTTCGTC AGCAGGTTAT CAGACTTTGC CTGCGGTAAT
CCTAGGTGTT GTGCTGAGGC TTCACTGATC TGGTCCATGC TTGAGAAGGG GTTTAAGCCC
TTGACGCTTG AATTCTTTAG CACTGATACT AATGCCGCTG AGTTGTGCAC TATGGCTCTT
GCTAGATGCT TCTCTAGGCA TGTGAATGTT GCGGGTTACG TTAGGGTTAG GTTCTTCGGT
GGTGGTGACT TGATGAGGGG TTTTGTAAAC CTTGTGGATG CCCTTGGTAG GGAGTTGAGT
AATTACTTGA TGCGTGGCTT CGAGGTTTTC ATAGGTATTA GTGGTGGTAT GAAGATTGAG
GTTGTGGCCT CTGTGCTTGT GGCTTCAATA CTGGGTGCTA GATTGGTTTA TGTAAGTGAG
AGCGGTGAGT TGGTTATTTT ACCGAGGTTA CCATTGAGCC TTAGGCGTGA GGTCCTTGAG
GGTGACTTGG CGTCCCTGCC CGGGGATTTG CTTGAGTCGC TGGAATCCTT AGGTCTCCTG
AGGCGTGGTG CCTCCGGTCT TGAGTTTCCC AGGTGGCTTC TGGATTTTAC CCGAGGTGGA
AGGCCTTCGG CTCGAACTTA A
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| Protein sequence | MGYFLGITVG VSLLRNALSS DALGDYSGVV GRVLQGSEDS AYVLFNDDFV SRLSDFACGN
PRCCAEASLI WSMLEKGFKP LTLEFFSTDT NAAELCTMAL ARCFSRHVNV AGYVRVRFFG
GGDLMRGFVN LVDALGRELS NYLMRGFEVF IGISGGMKIE VVASVLVASI LGARLVYVSE
SGELVILPRL PLSLRREVLE GDLASLPGDL LESLESLGLL RRGASGLEFP RWLLDFTRGG
RPSART
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