Gene Cmaq_1501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1501 
Symbol 
ID5709142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1581694 
End bp1582965 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content42% 
IMG OID641276010 
Producthypothetical protein 
Protein accessionYP_001541315 
Protein GI159042063 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.318324 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATACTGA TTACCATTAC CTTATTATTA GTGTTAGCGG TAGTTACGTT AGCGGTTTAT 
GTTCCATCAT CGCCATTGCC CGTTGTGTAT GTTAGTAAGG TTTACATTAT TTCAATGAAT
CTAACCCACG GTGAACCGCC ATTAAGCTAC ATTGATTCAC TGAAGTTAAC TCACCCATTA
GCCTACGGCA TATTGATTAA TGAGGAGAAT GTTACGGCTC CATGGCTTGG TGTGGCTGGT
TTGAGGTTAA CATTAATTAT TGCTAATGCG ACCTCAATGC AGTACCCAAT ATTGCTTAAG
TCTACTTCAG TGAGTGGGTT AAGGGGTGGT GTTGAGTGGG TGGTTAATTT AACATACCCG
GTTAACCTAA TGCCTCAGCC ATTAAGCCTT AGTGGTCGTT GGCTTGTTTC AATTGTTGCG
TCCGTGGGTG GGTTTAACTA CACTGTGTTC TTATTCATAA CTGGTAGTGA GTCGTTGGGT
GATGTGTTGG GTAATTTAAC CAGCGTTAAT GGTTACTTGA TTGAGGCTAA TGGCTTCAAG
TATTACCTGT GGCATCACTA CCTGTACAAT GGTTCACTAT ACTATGGTGT CCCACTACCC
GGTGTCACGG TCTTTTACTC CTGGTTCGGT AATGACTTGA ATGCGTCATT TAGGGTAACG
TCACTACCAG TGGTGTTAAA TAATCTACCA TTCCCAAGTT ACTTAAGGTA CTTCACCATT
ACGCTTAATC AATTCTACAA GGGGGTTCTG GTTAATTCAA CCAGTGCTGG TGTTGATTAC
CTGCTTGGTG GTGAGACTGA TTATGGTTAC AGGGTATTTA ATATTAGTAG GCTAGCCCCC
CTGGGTCCAT TAGTCTACTA CTCACCAATA CTAATGCTTC CCAATGGCTC ATTAATTAAC
CCATCATGCT TACCCATGTA TTATGAATTA ACCGTGAACC TAGGCTTCAT AAACCCAGCC
TACGGTAATG TAATACCGGT AACCCTGCTT AATGAGCAAT TGGGTGTCTC TGGTATTACT
GTAATTAATG GTTCACTCAT CCTGGGCGGG TACTTGGTGG GTTACGACTT CTATAATTTA
ACCTACGTTA AGATTACACC ATTAGGGGGC TTACTGGGTG AGGGTGTATT GAGTAATGCA
TGCACCTTAA TCACGCTAAG CCCCAGTGAC TCCACTATAC GTGTGAATAC TGTTAATACT
GGTTACTGGT TTATTATGCT GCATTGGTTG AGGTTAATTA CACCATTGCT AATTCACTAT
TGGGTTAGGT GA
 
Protein sequence
MILITITLLL VLAVVTLAVY VPSSPLPVVY VSKVYIISMN LTHGEPPLSY IDSLKLTHPL 
AYGILINEEN VTAPWLGVAG LRLTLIIANA TSMQYPILLK STSVSGLRGG VEWVVNLTYP
VNLMPQPLSL SGRWLVSIVA SVGGFNYTVF LFITGSESLG DVLGNLTSVN GYLIEANGFK
YYLWHHYLYN GSLYYGVPLP GVTVFYSWFG NDLNASFRVT SLPVVLNNLP FPSYLRYFTI
TLNQFYKGVL VNSTSAGVDY LLGGETDYGY RVFNISRLAP LGPLVYYSPI LMLPNGSLIN
PSCLPMYYEL TVNLGFINPA YGNVIPVTLL NEQLGVSGIT VINGSLILGG YLVGYDFYNL
TYVKITPLGG LLGEGVLSNA CTLITLSPSD STIRVNTVNT GYWFIMLHWL RLITPLLIHY
WVR