| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1494 |
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| Symbol | |
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| ID | 5709123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 1571708 |
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| End bp | 1573858 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641276003 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001541308 |
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| Protein GI | 159042056 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.580792 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAGG GTTTAATCAC TAAGTTACTG ATCCTTAGTA TATCAGTACT GGCATTGGTT
ACAGTATTCT CAAGCTACGT ACCATCATTA ACCATGGCTC AAACATACAA CATCACACCA
TATAATACAA TATACATGTT CGTTACTAGG AGTCCACCGG CAACTGGTTG GAGTACTTAT
AATCCTAATA TTTTTCAAGG TGGCATATGG TGGTATGGTG TTTACCAGCA GTTTTTGGCT
GCGGTTAATA TAACTACTGG TGAATTTGTA CCTCTTCTTG CTGATAATTG GACGATGACA
GTGCTACCTA ATGGTACCTT AGAAGTCTTA GTGCATCTTA GGCATAGTGG GTGGGATAAT
GGTATTCCAG TAACCTGCTG GGATGTTTGG GCAACTAATA TGCTTCTTGG CCTTGTATCA
GCAATGGTTG GTAATGTTAC CGTGTTTAAT AATTACACGT GCGCATTCAT GATACCTAAG
GGTTACTATG TACCATTAAC CCTACCTGGC GCCCATGAGG CTAACTCATT CATAGCCCTT
GAGTGGGGTC AAGGTATTGC CCTTGATTGG CAGGACAGCT ACGTATGGGA ACCAATAATA
AAGACCGCGG CTGCAAACTA TAGCTGGATT TGGTTGTACA TGTTCGGTAA CTCAACCCAG
AAGGGTGAGG CTGCTAAGGT CCTCTCAACA TTAATCCATG ATTACTTAAC CTACAAGCCA
CCCTACACCA CTGGTTACTC AAATGGACCA TACTACCTAT GCGATATTAC GCCTGAATAC
TTCCTACTCT GCAAGAACCC ATACTACTAT ACTGTTAATG AATTCAAGCC CGATTACATT
GTTGAATGGC AGTACTCCTC AATGTCTCAA GTTTACGCAG CCTTAGCCAC AGGTAAGATT
AGCCTATGGT CGACTTGGAT CGGCTCAGTA TCACCAACAG TAATACCAAC AATAACCAGT
AACCCGTACA TTAAGGCATT ATCATTCCCA GCCTTCGGTG GTGATGCCTT GTATTTCAAC
TTCCTTAATC CTTGGTTGGC TATGCCTCAG GTTAGGCAGG CTATTTACTA TGCTGTTAAT
TGGACTCAAT TAGCCCAAGC AGCATACGGT GTAGGCTACA CGTACCCATC ACCAATGCCT
CAAGATGGAT TAATGCCCTA CTACACTAAT TGGCAAAGCA TGATAACCAG TTACTTCGCA
TCACTAGGCC CACAATGGAC TATGGTAAAT TACACTTATA ATGCTTCATT GGCTACTAGC
CTACTTGAGA GTGTTGGCTT CACTAAGAAG AATGGTGTAT GGTATACACC CAACGGCTCA
GAATTCACAT TAACACTATA CATCGGCTCA AACGCACCAC CAGCGCAGTT AACACTGGCA
ACAGAAATAG CTAATGCATT AACAAGCTTC GGAATACCAA CAATAGTAAT AACATATCCC
TCAGCTGAGG GGCTTACAAT AATTAAGCAG GGTAAGTACG ACTTATTATT CTCATACTAC
AGTGACATAT ATAGGCCAGG CGTACCATAC TACTTCCCTG AGGCATTCTA CTTCCTAGGT
TACCCATTCA ACTACAGTCA CTGGAATGGT ATCGTAACTC TACCTAATGG AACCTCATTC
AGCGCACCTG AATGTGGTAC CATGTTATCG TTGAATTGCA TACTCAGGGT TGCCTGGGCC
ATAAATCATG ATCCATGGTA TATTCAGATT GATTGGAATA GTGGTATAGT ATTCCTCAAT
ACCCAGTACA TCAACTGGCC CATTAATGAC ACGTCAATTT GGATCGGCAC ACTACAACAC
ACTACACCAG CATGGACAGT GTTACTGACT CACATATCCT TTAAGCCACC AGTTACTACT
ACTTCGACTA CTACTCCTGT TTCCACTGTT ACTTCTACTG CTGTGGTTAC TTCTACGACT
ACTGTTGTTA CTTCGACTAC TGTGGTTAGT GGTACTACTA CGACTTACAC AACCACAAGC
ACTGTACCAG TAACAGCAAC AGTAACATCA ACAATACCGG TAACAACCAC GGCAGTATCA
ACAGTAACAG TCACTAAACC AGTAATAAGC ACAACACTAA TAATAGGCAT AATAATCATA
GTAATCATCA TAGTAGCAGC AGTAGCAGCA ATAGCATTAA GAAGAAGATA A
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| Protein sequence | MSKGLITKLL ILSISVLALV TVFSSYVPSL TMAQTYNITP YNTIYMFVTR SPPATGWSTY
NPNIFQGGIW WYGVYQQFLA AVNITTGEFV PLLADNWTMT VLPNGTLEVL VHLRHSGWDN
GIPVTCWDVW ATNMLLGLVS AMVGNVTVFN NYTCAFMIPK GYYVPLTLPG AHEANSFIAL
EWGQGIALDW QDSYVWEPII KTAAANYSWI WLYMFGNSTQ KGEAAKVLST LIHDYLTYKP
PYTTGYSNGP YYLCDITPEY FLLCKNPYYY TVNEFKPDYI VEWQYSSMSQ VYAALATGKI
SLWSTWIGSV SPTVIPTITS NPYIKALSFP AFGGDALYFN FLNPWLAMPQ VRQAIYYAVN
WTQLAQAAYG VGYTYPSPMP QDGLMPYYTN WQSMITSYFA SLGPQWTMVN YTYNASLATS
LLESVGFTKK NGVWYTPNGS EFTLTLYIGS NAPPAQLTLA TEIANALTSF GIPTIVITYP
SAEGLTIIKQ GKYDLLFSYY SDIYRPGVPY YFPEAFYFLG YPFNYSHWNG IVTLPNGTSF
SAPECGTMLS LNCILRVAWA INHDPWYIQI DWNSGIVFLN TQYINWPIND TSIWIGTLQH
TTPAWTVLLT HISFKPPVTT TSTTTPVSTV TSTAVVTSTT TVVTSTTVVS GTTTTYTTTS
TVPVTATVTS TIPVTTTAVS TVTVTKPVIS TTLIIGIIII VIIIVAAVAA IALRRR
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