| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1485 |
|---|
| Symbol | |
|---|
| ID | 5709707 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | - |
|---|
| Start bp | 1562014 |
|---|
| End bp | 1562532 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641275994 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001541299 |
|---|
| Protein GI | 159042047 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2512] Uncharacterized membrane-associated protein/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.563194 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.242902 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTAGTG ATGCTGTACA CACTATTTTA CTTGTGGTTG GTGCCTCATT AATCATCATA
GGCTTATTAC TCATCTACGG TGGTTTAGTT ATGATTAACC GCATGGCCTA CTACCACATG
ATGGGTATGA TGGGTGGTTT CCTAGCCTAC TACCCACTAC TCCTACCAAC GGCACTACTC
GTGATTGGTG CACTACTCAT ATTCGTACCA ATGATGGGTA GGCGTAATCA TGCAGCGGTG
TTATCAACCA GTGTTAATGC ATCAACCAAC GCTGAACCTG TTAATGATCT TGAACGTGTT
TTAAGACTAC TCCCAAGGCA GGAGCGTGAT GTTCTTAGGT ATATAGTTAA GTCCGGTGGT
GAGGTTTACC AGTACCAGTT AACTAGGGAT TTAGGGTTGA GTAAGGTTAG GGTGTGGAGG
ATTGTTAAGA GGCTTGAGGA GAAGGGTCTT GTGGAGGTGG TTAAGGTTAA GGGAAGAAAC
ATTATTAAGG TTAAGGATTT TAAGAGTAAT GGTGATTAA
|
|---|
| Protein sequence | MTSDAVHTIL LVVGASLIII GLLLIYGGLV MINRMAYYHM MGMMGGFLAY YPLLLPTALL
VIGALLIFVP MMGRRNHAAV LSTSVNASTN AEPVNDLERV LRLLPRQERD VLRYIVKSGG
EVYQYQLTRD LGLSKVRVWR IVKRLEEKGL VEVVKVKGRN IIKVKDFKSN GD
|
|---|
| |