Gene Cmaq_1483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1483 
Symbol 
ID5709705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1560930 
End bp1561790 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content49% 
IMG OID641275992 
Producthypothetical protein 
Protein accessionYP_001541297 
Protein GI159042045 
COG category 
COG ID 
TIGRFAM ID[TIGR03095] rusticyanin 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.200109 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGGA AAACCTGGTT AATAGTGGGT GTAGTAACCG TGTTGGTTAC AGTGGGTGCA 
CTGGTTCTGG CTGCCAACGC ATACTACTAT TACTACTACA GTAACTACTA TGGTGGAGTA
CCGTACTCCG GCCCCTGGGG TATGATGAGT TGGATGTGGG GTTACTGGAG TGGGTACGTG
CATCCAGTGG GCATTAATGC ACCTGGTTAC GTAAACCCAA CGACGGGTTA CGCATCGTTC
ACAATACCCA TTAGTAAGGC TGTTAACTTA TCCATGAGTA CCCCAAGTTA CGTCCACGTA
TATAGGAGTA ATAACACCAT CGTGTTCACC AGTAGTGACA TAACACTGGT GGCTTTAGCC
ATGATGGGTG ATGACGCCGT TAACATGACT GGTATGCCGC TGCCTGGTTA TGCCCACGGT
GACGTCTTCG TGATATACGG TCTCATAAAC CCAACACTGG TGATACCGCA GGGTGCTGTT
GTTCACGTAA TAGTCATTAA CCTTGATGAC GACATGTACC ACAACCTAAT AGTAACCGCA
GTACCACCAC CGTACCCGTA TAACGTGATG CCTTACGTGG GCATGTATGG TGGCTACATG
GGCCCAGGCA TGATGACCAT GATGCAGTGG CTACCGCCAG CTAACTATAA TGCTGGCTAC
GCCTACGGTT ACGAATACAC CATAACCCTC AATGCCCCAG GCACATACTG GTACCTATGC
ACCTACCCTG GCCACGCACA GGATGGAATG TACGGTGAAG TAATAGTGAC TGGTGATGCT
GGTTACCAGG GTTCAGTGAA TAGTAATGTT AACGCGTACT ACGGGTACCC TGGTATGGGT
CCTGGTATGA TGGGGTGGTG A
 
Protein sequence
MNRKTWLIVG VVTVLVTVGA LVLAANAYYY YYYSNYYGGV PYSGPWGMMS WMWGYWSGYV 
HPVGINAPGY VNPTTGYASF TIPISKAVNL SMSTPSYVHV YRSNNTIVFT SSDITLVALA
MMGDDAVNMT GMPLPGYAHG DVFVIYGLIN PTLVIPQGAV VHVIVINLDD DMYHNLIVTA
VPPPYPYNVM PYVGMYGGYM GPGMMTMMQW LPPANYNAGY AYGYEYTITL NAPGTYWYLC
TYPGHAQDGM YGEVIVTGDA GYQGSVNSNV NAYYGYPGMG PGMMGW