Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1483 |
Symbol | |
ID | 5709705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1560930 |
End bp | 1561790 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641275992 |
Product | hypothetical protein |
Protein accession | YP_001541297 |
Protein GI | 159042045 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03095] rusticyanin |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.200109 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAGGA AAACCTGGTT AATAGTGGGT GTAGTAACCG TGTTGGTTAC AGTGGGTGCA CTGGTTCTGG CTGCCAACGC ATACTACTAT TACTACTACA GTAACTACTA TGGTGGAGTA CCGTACTCCG GCCCCTGGGG TATGATGAGT TGGATGTGGG GTTACTGGAG TGGGTACGTG CATCCAGTGG GCATTAATGC ACCTGGTTAC GTAAACCCAA CGACGGGTTA CGCATCGTTC ACAATACCCA TTAGTAAGGC TGTTAACTTA TCCATGAGTA CCCCAAGTTA CGTCCACGTA TATAGGAGTA ATAACACCAT CGTGTTCACC AGTAGTGACA TAACACTGGT GGCTTTAGCC ATGATGGGTG ATGACGCCGT TAACATGACT GGTATGCCGC TGCCTGGTTA TGCCCACGGT GACGTCTTCG TGATATACGG TCTCATAAAC CCAACACTGG TGATACCGCA GGGTGCTGTT GTTCACGTAA TAGTCATTAA CCTTGATGAC GACATGTACC ACAACCTAAT AGTAACCGCA GTACCACCAC CGTACCCGTA TAACGTGATG CCTTACGTGG GCATGTATGG TGGCTACATG GGCCCAGGCA TGATGACCAT GATGCAGTGG CTACCGCCAG CTAACTATAA TGCTGGCTAC GCCTACGGTT ACGAATACAC CATAACCCTC AATGCCCCAG GCACATACTG GTACCTATGC ACCTACCCTG GCCACGCACA GGATGGAATG TACGGTGAAG TAATAGTGAC TGGTGATGCT GGTTACCAGG GTTCAGTGAA TAGTAATGTT AACGCGTACT ACGGGTACCC TGGTATGGGT CCTGGTATGA TGGGGTGGTG A
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Protein sequence | MNRKTWLIVG VVTVLVTVGA LVLAANAYYY YYYSNYYGGV PYSGPWGMMS WMWGYWSGYV HPVGINAPGY VNPTTGYASF TIPISKAVNL SMSTPSYVHV YRSNNTIVFT SSDITLVALA MMGDDAVNMT GMPLPGYAHG DVFVIYGLIN PTLVIPQGAV VHVIVINLDD DMYHNLIVTA VPPPYPYNVM PYVGMYGGYM GPGMMTMMQW LPPANYNAGY AYGYEYTITL NAPGTYWYLC TYPGHAQDGM YGEVIVTGDA GYQGSVNSNV NAYYGYPGMG PGMMGW
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