Gene Cmaq_1465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1465 
Symbol 
ID5709348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1542028 
End bp1542933 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content45% 
IMG OID641275974 
Producthypothetical protein 
Protein accessionYP_001541279 
Protein GI159042027 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.370273 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0213471 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCTC ACTTACTAAT ATTAATTCTA ATTATACTGA TTATTGGGGT TCTAGCTATA 
CCTACGGTGG CCCAGGTAAA TCAACTACTC ATTGCCTACT CCATGGTGTC TAAATTGGGT
GCTGAGGGCG TCAATGTGAC TTCACTGGTA AATTCACTCA ATGAAGCCAT TGAGTTCGAG
CAGGAGGGCT ACACCAGCAA TGCCACGTTA ATAGCTGAGC ACGTAATTAC CACAGTCAAC
TCCATGGCAC CCGTGGTTCA CCTGCACCAC GTACTTAACA CAGCATTGAC AATAATCGTA
TTGCTCATGG TCATTACATT GTCCGTACTA TTGTACGTAA GGCGTAGGGA GATCCTTGGC
AGATTATGGC TCAGGTTTAG GGGTAGGTAT AGTGTTAATC GCATCAGTGG TAGCGAAAGA
ACTTTATTGT TTAATGAGGA GGTCCTCGCT GTGGTGGTGG CCGTAATTGT GGTTTTAGTT
GTCTTCGGAG TCGCCATAAC GATCATTGGT GGTTCGCATG AACCCTTCTC AGCAATAGCG
CTTCTTAATT CTAACATGCA TATTGGTAAT TACCCAACCG TGATTGCGGT TGGACAGCCC
GTACACCTAT ACCTATTTAT TTACAATCAC ATGAATAAGC TCATTTGGTA CGTGGTCAAG
GTGTACATAA TGAGCAATAC CACCGTGGAG CCACCACTGG TCCTCACACC TATAGTGACG
TATCAAGTGA TCCTCCTGAA CAATGCCACC TACACTGCTC CATTAACCTT CTCCCTAAAC
TCAACCGGCA CTTATAGGGT TATAGCTGAG CTTTGGTACT ACGACCCAAG CAACCTAACA
CTGACTTATA CGGGTAATTA CGTGCAGTTG TGGATAAACG CCACTGGGGT GATGCCCAGT
GGCTAG
 
Protein sequence
MKSHLLILIL IILIIGVLAI PTVAQVNQLL IAYSMVSKLG AEGVNVTSLV NSLNEAIEFE 
QEGYTSNATL IAEHVITTVN SMAPVVHLHH VLNTALTIIV LLMVITLSVL LYVRRREILG
RLWLRFRGRY SVNRISGSER TLLFNEEVLA VVVAVIVVLV VFGVAITIIG GSHEPFSAIA
LLNSNMHIGN YPTVIAVGQP VHLYLFIYNH MNKLIWYVVK VYIMSNTTVE PPLVLTPIVT
YQVILLNNAT YTAPLTFSLN STGTYRVIAE LWYYDPSNLT LTYTGNYVQL WINATGVMPS
G