Gene Cmaq_1452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1452 
Symbol 
ID5709213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1530353 
End bp1530757 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content39% 
IMG OID641275962 
Producthypothetical protein 
Protein accessionYP_001541267 
Protein GI159042015 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.287706 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0000616902 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGTTATAG ACGAGTACCT AAGTAAAAGG GAGCTTTATA CGTTAATATC CCAACATGAC 
TTATACATTC ATGGCTCATT GAGTGACGGT TTTGGCTTAC CAGTCATTGA GAGTATGGCT
GTGGGGGTAC CGCCTGTAGT ATTAGATGCA CCACCATGGA ATGAGGTAGT AAACGATTCC
GTAGGTTTCC TGGTTAAAGT AGGCAGAGAG AATATTATAA TGCGAAAACC ATATAAGTTT
AAGATAAGGA TATTTAGAGA AGACAATGCT TTAGATACGC TGGAATACGC ATTAAATGAA
GTTATGAACA ACAGGATGGG GTGGTTCACG AAGGTTAGGA AGTACATAAG GCAAAGATAC
GATGCACACA GTCTTTATAA AGAATTTGCA AAACTCTTAG AATAG
 
Protein sequence
MVIDEYLSKR ELYTLISQHD LYIHGSLSDG FGLPVIESMA VGVPPVVLDA PPWNEVVNDS 
VGFLVKVGRE NIIMRKPYKF KIRIFREDNA LDTLEYALNE VMNNRMGWFT KVRKYIRQRY
DAHSLYKEFA KLLE