Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1452 |
Symbol | |
ID | 5709213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1530353 |
End bp | 1530757 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641275962 |
Product | hypothetical protein |
Protein accession | YP_001541267 |
Protein GI | 159042015 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.287706 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0000616902 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGTTATAG ACGAGTACCT AAGTAAAAGG GAGCTTTATA CGTTAATATC CCAACATGAC TTATACATTC ATGGCTCATT GAGTGACGGT TTTGGCTTAC CAGTCATTGA GAGTATGGCT GTGGGGGTAC CGCCTGTAGT ATTAGATGCA CCACCATGGA ATGAGGTAGT AAACGATTCC GTAGGTTTCC TGGTTAAAGT AGGCAGAGAG AATATTATAA TGCGAAAACC ATATAAGTTT AAGATAAGGA TATTTAGAGA AGACAATGCT TTAGATACGC TGGAATACGC ATTAAATGAA GTTATGAACA ACAGGATGGG GTGGTTCACG AAGGTTAGGA AGTACATAAG GCAAAGATAC GATGCACACA GTCTTTATAA AGAATTTGCA AAACTCTTAG AATAG
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Protein sequence | MVIDEYLSKR ELYTLISQHD LYIHGSLSDG FGLPVIESMA VGVPPVVLDA PPWNEVVNDS VGFLVKVGRE NIIMRKPYKF KIRIFREDNA LDTLEYALNE VMNNRMGWFT KVRKYIRQRY DAHSLYKEFA KLLE
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