| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1449 |
|---|
| Symbol | |
|---|
| ID | 5708645 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | + |
|---|
| Start bp | 1527819 |
|---|
| End bp | 1528760 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 641275959 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_001541264 |
|---|
| Protein GI | 159042012 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.860279 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0000879014 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGACAGTG TGGGCAAAGT AACATACATA ACTTACTCTG GGATACCGCA CCTGGGACAT
GTAACATGGG TTTCACTGCT TAAGCTCATA GCAAAAACAA GGGTTATAAG TTATAAGGAG
GTACTAATAA AACTACCCAC AAATGAGATA ATAATAGCAG AGGGTTTAAG ACCAACATTA
ATAAGCATGT CATTAAAACC ATTGAATAAA TGTATAGTAG CCATAGCCCT CTCACCATCA
ATCCTGAATA AAAAGGCACA CATGCTGTAC TCGAGGGCTG ACGTAATAAT AGCTGTATCG
GAAATGGTGA GACAATTATT TAATCCAGAA AAAATCGTGG TTGTACACCC AAGACCACCT
GACCTAGAGC ATTTAATAAA ACTGAACGTA GACGATAAAA AACCCTGGAT ATGCTACTCA
GGCCCGTTAA TACCAATAAA GGGGATCCAC ATCATACCCG AGGTGGTAAA ACACATCACA
AGGAGTGCAA ATAATGTGAA AATGATAGTA ATGGGCGCAG GGGACACGAT GTCACTAAGA
AGAAAAAGCA AGGAACTCGG AGTCGAGGAT AAAATAGTCA TAGCAGGACC ACTCCCAAGA
CCAAAGGTAA TAAATACATT ACGCCACTGC AGCATCTACA TGCAACCATC ATTATTTGAC
GCATTCTCAA TAGCTGTTGC TGAAGCAATG GCACTCGCAA ACGTACCCAT CATAACTAAG
AATGTGGGAT CAAAAGACCT AGTAGAAAAA CTAGATAGAT CGCTGATTGT AAGTTATGAT
AGCGAAGCCA TAGCTCAAAT AATACTAACA ATCCTGAGCC CCAAAAACAC GCAGGAGCTC
GGTAAAAATG CCAGGGAAAT AGTGGCCAGG GAGCTATCCC TGAAAAATAC GGCAAGGAAA
CTAACAGAGG TACTTGAAAG ATGCCTAAAG CATGCATATT AA
|
|---|
| Protein sequence | MDSVGKVTYI TYSGIPHLGH VTWVSLLKLI AKTRVISYKE VLIKLPTNEI IIAEGLRPTL
ISMSLKPLNK CIVAIALSPS ILNKKAHMLY SRADVIIAVS EMVRQLFNPE KIVVVHPRPP
DLEHLIKLNV DDKKPWICYS GPLIPIKGIH IIPEVVKHIT RSANNVKMIV MGAGDTMSLR
RKSKELGVED KIVIAGPLPR PKVINTLRHC SIYMQPSLFD AFSIAVAEAM ALANVPIITK
NVGSKDLVEK LDRSLIVSYD SEAIAQIILT ILSPKNTQEL GKNAREIVAR ELSLKNTARK
LTEVLERCLK HAY
|
|---|
| |