Gene Cmaq_1445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1445 
Symbol 
ID5708696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1522493 
End bp1523632 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content44% 
IMG OID641275955 
Productglycosyl transferase group 1 
Protein accessionYP_001541260 
Protein GI159042008 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00000927133 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATAATAG TACACACGCA TCATCACTAC TGGCCGGTAG CGGGAGGAAT AGAAAATGCA 
ATTAAATACC TCGCCGAGGA ACAGGCAAAA CTTGGTCACG AGGTGCACAT AGTAACGGGC
ACCTATGGAG CCCAGAAAAG ACCTAGGGAG GAAGAAATAA ACGGTGTGCA CGTACATAGA
ATTAAGGCGT GGAGATTAGG CTACCCAGAC CTAACAATAC CAAGGGAAAC ACCTAGGGAA
CTGCTCAAGA GGGCTGACGT GATTCATGCT CACTCACAAA ACAGCTTATT CTCAGTGAGA
ATAGCCCAGG AGGCACATGA GCTAGGTGTT AAGGTAGCCA TACACTACAT GGCTGTCGAC
ACCCTCCAAA CACACCCAAA CCCAGCCATA AGGCTCCTTG GACCAATATA CGCCAGGAGA
AACCTAGAAA TGGCAAAGGA AATAGCGGAC ATACACCTAG CAAGAAGCAA AAGGGACGTA
GAAAAACTAA GAAAATACGG AATACAAGCA CACTACCTAC CAGACGCAAT ACCAAAACAC
TACCTAACAA AACCCAAAGC AGACCCAGAG GAATTCAGGA GGAAATACGG AATAACACAG
GACAAACTAT TCATATACAT AGGAAGAATA CACAAACTCA AGGGACCACA CGTACTAGTC
AAGGCGCTAC CATACCTAAG CAACGACATA GCAATAATAA TGGCAGGACC AGACAACGGA
TACCTAAAAC AAACCCTAGA ACTAGCCAAT AAACTACACG TGAAAGACAG ACTATATTAC
CTAGGCTACG TAGACGAAGA TACAAAAATA AACGCCATAG ACGCATCAAC GGCGCTAGTC
CTACCATCAA CCACAGACTA TGTAGAGGTA TACCCCATGA CAATAACCGA GGCATGGGCA
AGAGAAAAAC CAGTAATAGC CACAAACGTA GGAGGAATAC CATACAGGGT AACACACGGC
ATAAACGGAC TAATAATACC ACCAAACAAC CCACAGGAAC TAGCCAAAGC AATACAACAA
CTAGCAAACA ACCCAGAAAA GACACAACAA ATGGGTAAGG AGGGTAAAAA GGAAATCAAG
ACATGGGACG AAATCGCAAA AGAAACCATA AAAATATACA ACACCACAAA CAACCCATGA
 
Protein sequence
MIIVHTHHHY WPVAGGIENA IKYLAEEQAK LGHEVHIVTG TYGAQKRPRE EEINGVHVHR 
IKAWRLGYPD LTIPRETPRE LLKRADVIHA HSQNSLFSVR IAQEAHELGV KVAIHYMAVD
TLQTHPNPAI RLLGPIYARR NLEMAKEIAD IHLARSKRDV EKLRKYGIQA HYLPDAIPKH
YLTKPKADPE EFRRKYGITQ DKLFIYIGRI HKLKGPHVLV KALPYLSNDI AIIMAGPDNG
YLKQTLELAN KLHVKDRLYY LGYVDEDTKI NAIDASTALV LPSTTDYVEV YPMTITEAWA
REKPVIATNV GGIPYRVTHG INGLIIPPNN PQELAKAIQQ LANNPEKTQQ MGKEGKKEIK
TWDEIAKETI KIYNTTNNP