| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1443 |
|---|
| Symbol | |
|---|
| ID | 5708694 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | + |
|---|
| Start bp | 1520417 |
|---|
| End bp | 1521508 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641275953 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_001541258 |
|---|
| Protein GI | 159042006 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.739499 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0000273098 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGGATAG TACACGTAGC ACCATTTTAT AAACCGGTAA TAGGCGGCGT GGAGGAGGTA
GTGCAAAGAA TAGCGGAGTA CACAGCAGCT AGGGGGCATG AGGTACACGT AATCACATAC
AATAGGCTCA GGACAGGAGG CAAAGGTGCA CTACCAAGGG AGGAATGGAT CAATGGGGTG
CATGTAATAA GGCTGAAACC AAACTTAACA TGGAGTCACG GAACATACAG TAGGGAACTA
CCTGAAGTAC TTAGGAAACT AAAGCCAGAC CTAGTCCATG TGCACGTGTG GAGGCACCCA
CATGTAATCC AGGTGGCAAG GCTAAGGAGG GAGATGGGAT TCAAAGCGAT ACTGCATGGT
CATGCACCAT TCCATAAACT AAACCAAGTG GGGCCAATAA CCTGGACATA TTATAAACTC
GTAGACACAA CGCTAAGAAG CATCCTAAAG AATTACGACA CATACATAGC ATTAACGAAA
CATGAAGCAG AAACAATAAG GAGAATGGGA CTAGAAGAAG ACAAAATAAT GGTAATACCG
AATGGAATAA ACCAGGATCA ATGCATACTA AGCAATGAAA GAGAGGACAT GGTACTTTAC
CTGGGTAGAA TCAGTAAGGT AAAGAACATT GAATTACTAG TAAAGGCCGC GAAATACATA
AAGCATGCAC AATTAGTAAT TGCAGGGCCA GATGAAGGAC TAATAAATAC AATACTACAA
TATGCAGGAA AACACAACAT AGAAGTAAAG TATCTAGGCG CAGTGAGTGA GGAAAAGAAA
CATGAATTAT ACCTAAAAGC CAAGGCCTAT GCACTACCAT CAATATATGA ACCATTTGGA
ATAACACTAC TCGAAGCAGG AATACACGCA ACACCAAGCG TGATAACGGG GAATGGGGGA
CAAGTCTACG CAGCACCACC AGGTAAGGCA AGCCTATGGG CAGAACCAAA GCCGGAGAAA
TACGCTGAAG CCATCATACA ACTGCTAACC GACCAAGAGC TACATAGGAG ATTAAGCCAA
GGCGCTCTTC AGCACGCTGA ACAACACCTA TGGAGCAAAA TACTACCAAG GTACGAGGAA
ATATATGGCT AA
|
|---|
| Protein sequence | MRIVHVAPFY KPVIGGVEEV VQRIAEYTAA RGHEVHVITY NRLRTGGKGA LPREEWINGV
HVIRLKPNLT WSHGTYSREL PEVLRKLKPD LVHVHVWRHP HVIQVARLRR EMGFKAILHG
HAPFHKLNQV GPITWTYYKL VDTTLRSILK NYDTYIALTK HEAETIRRMG LEEDKIMVIP
NGINQDQCIL SNEREDMVLY LGRISKVKNI ELLVKAAKYI KHAQLVIAGP DEGLINTILQ
YAGKHNIEVK YLGAVSEEKK HELYLKAKAY ALPSIYEPFG ITLLEAGIHA TPSVITGNGG
QVYAAPPGKA SLWAEPKPEK YAEAIIQLLT DQELHRRLSQ GALQHAEQHL WSKILPRYEE
IYG
|
|---|
| |