Gene Cmaq_1441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1441 
Symbol 
ID5708692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1518925 
End bp1519848 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content43% 
IMG OID641275951 
Producthypothetical protein 
Protein accessionYP_001541256 
Protein GI159042004 
COG category[S] Function unknown 
COG ID[COG4938] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0532167 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00000885873 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAAACTAC ACATTAAGAA CTGGAGAAGC ATAGAGGAAG TAGAGATAGA ACTAAAGCCA 
GTAACAATAA TCATGGGGCC AAACGACGCA GGGAAATCAA GCCTCGCATA CGCACCGTAC
TTCCTAACAA AAACCATCAA GTGGAGAGAC GCAAACAAAG TACTAAAATT ACTATACGGC
ACAGAACTAA ACAACATCGC AAGGCACGAA TACGACAAAC CACAATACCC AGTAATAATC
GAAGTAGACG GAGCACGCTT CAAGGCTCAA AACCCCAACG ATGTAAAGAA AGCCGACATA
GAGATAGCTG GGGAAAGTCC CTGGAACGAC GGCTACCTAC TACCATCGGG AAGGCTTACC
TTCATGAAAA TGCTACGAAT AGTGCCTAGA ATCCTCAGAC AGATAACAAG AACACGAGAC
TATTCAGCAT TTCCACCACC GATGTACCTA TTCCTCGATG ATTTAGTGAG GATTCACGGG
ATTGGCCCCC TACTACTGGA GCATGAACTA ACCGAGTACA CAGACCCATT TGCAAAAGCA
AAACTACCAC TAAACCTAGC ACCAGACGGA ACCACAGACC ACTCACTAAT AAACCTCTTC
ATAAACAACG TCCAGGAAGG CAGCCTACTA ATCATCGAGG AACCAGAAAT ACACAAAAAC
CCAACCCTAG TGATAGAACT CACAAGACAA ATAACACAGG AAGCAATAAA CAAAAAACTA
ACAATAATAA TAACAACACA CAGCGACATA ATACCACAAA CAATAGCCAA AACCGTGGAA
GAAGGCAAAA CAAAGCCGAA CAACGTAGCA ATCTACTACC TAGAGAGAAA ACCCTGGACA
CAGGCAAGGG AACTAAAGAT CCACGAAGAC GGCACAATAG AGGAACTACC AGACGTGGAG
AAAATAATCA CGGAATTATT CTAA
 
Protein sequence
MKLHIKNWRS IEEVEIELKP VTIIMGPNDA GKSSLAYAPY FLTKTIKWRD ANKVLKLLYG 
TELNNIARHE YDKPQYPVII EVDGARFKAQ NPNDVKKADI EIAGESPWND GYLLPSGRLT
FMKMLRIVPR ILRQITRTRD YSAFPPPMYL FLDDLVRIHG IGPLLLEHEL TEYTDPFAKA
KLPLNLAPDG TTDHSLINLF INNVQEGSLL IIEEPEIHKN PTLVIELTRQ ITQEAINKKL
TIIITTHSDI IPQTIAKTVE EGKTKPNNVA IYYLERKPWT QARELKIHED GTIEELPDVE
KIITELF