Gene Cmaq_1436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1436 
Symbol 
ID5708907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1515554 
End bp1516579 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content49% 
IMG OID641275946 
Producthypothetical protein 
Protein accessionYP_001541251 
Protein GI159041999 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000012396 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00000304968 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAGCGGG TAAAACTCAG GTTTGCGGAC CGTGAGGTGG AGTTCGTGGA TAGGGAGGTG 
GCAATAAGGC AAATTGAGGA ATTGGCTGGA AAAGGCACAT GGTGGCCCCT GGTAATCTAC
GGGCCTGAGG GTTGCGGGAA ATCAGCACTC CTTAAACAAG CCATTGAGGT GCTTAGAGAA
TATGGTTACG AAGTTTCATA CATAAGCCCA CTGTCCAGGT CTGGGGAGGA TAGGTTCACC
CTCACAGAGG GATTGAGGCG GTTAGTAACG GGCGTTGGCT CACTGCTAAT TGGCGATGCA
TCAAGACTGA TTAACATAGC CGTGGAGTTA CTCTATGACG CGGTCAGGAA AAGGCTCACA
GGGAGGATAG CCTTATTAGC CGATGATGTC TTCCAAGCCA TTGGACTAGA TAAAGCGGAA
TTGCTCGTAA AGGGACTACT AAACATGGTA GAGTACCCAT CAGTTGATTA TGAGAAAATC
GTCATACTCG TATCCTCAAG TGAAGGAATA ACCTGGGAAC GTATTGGGCG TCATAGGTGG
GCTGAGATAA AGATCATGTG GAGCATGCCC AAGGAGGGGT TTAGGCAATT ATATGAGCAA
GTACCGGGAC CAAAGCCGGA CTTTGAACAA GTATGGAGAT GGACTGGTGG AAACCCAGAA
ATGTTAGAGA GACTCTATGG GGCAGGCTGG GACATTAACG GCATAATCAA CGACATGATT
AAGGACAGGA AACTAGACAT TATGGTGAAA ACCCTAGACA GGGAGCAGGT GCAGATACTA
AGGCGGGCCA TTGAGGACCC AGATGTGATT TATGATGAGG CGGCTAGGGC TATGCCGCTA
ATGGATAAAT TAATCGAGAA TAACCTAATC ATCAGGATAT GGTACAGGGA GCAAAGGGTG
TGGATCGATC AACCACCTGA AAAAGACCCA GAACTGGGCA TAGGCACCCA CTTCGCCTGG
CAGACGCCAA TGCACAGGGA GGCCGTGAGG AGGGTGCTGG GCAATGAACT TGAAAGGCAT
AGATGA
 
Protein sequence
MKRVKLRFAD REVEFVDREV AIRQIEELAG KGTWWPLVIY GPEGCGKSAL LKQAIEVLRE 
YGYEVSYISP LSRSGEDRFT LTEGLRRLVT GVGSLLIGDA SRLINIAVEL LYDAVRKRLT
GRIALLADDV FQAIGLDKAE LLVKGLLNMV EYPSVDYEKI VILVSSSEGI TWERIGRHRW
AEIKIMWSMP KEGFRQLYEQ VPGPKPDFEQ VWRWTGGNPE MLERLYGAGW DINGIINDMI
KDRKLDIMVK TLDREQVQIL RRAIEDPDVI YDEAARAMPL MDKLIENNLI IRIWYREQRV
WIDQPPEKDP ELGIGTHFAW QTPMHREAVR RVLGNELERH R