Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1436 |
Symbol | |
ID | 5708907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1515554 |
End bp | 1516579 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641275946 |
Product | hypothetical protein |
Protein accession | YP_001541251 |
Protein GI | 159041999 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000012396 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00000304968 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAGCGGG TAAAACTCAG GTTTGCGGAC CGTGAGGTGG AGTTCGTGGA TAGGGAGGTG GCAATAAGGC AAATTGAGGA ATTGGCTGGA AAAGGCACAT GGTGGCCCCT GGTAATCTAC GGGCCTGAGG GTTGCGGGAA ATCAGCACTC CTTAAACAAG CCATTGAGGT GCTTAGAGAA TATGGTTACG AAGTTTCATA CATAAGCCCA CTGTCCAGGT CTGGGGAGGA TAGGTTCACC CTCACAGAGG GATTGAGGCG GTTAGTAACG GGCGTTGGCT CACTGCTAAT TGGCGATGCA TCAAGACTGA TTAACATAGC CGTGGAGTTA CTCTATGACG CGGTCAGGAA AAGGCTCACA GGGAGGATAG CCTTATTAGC CGATGATGTC TTCCAAGCCA TTGGACTAGA TAAAGCGGAA TTGCTCGTAA AGGGACTACT AAACATGGTA GAGTACCCAT CAGTTGATTA TGAGAAAATC GTCATACTCG TATCCTCAAG TGAAGGAATA ACCTGGGAAC GTATTGGGCG TCATAGGTGG GCTGAGATAA AGATCATGTG GAGCATGCCC AAGGAGGGGT TTAGGCAATT ATATGAGCAA GTACCGGGAC CAAAGCCGGA CTTTGAACAA GTATGGAGAT GGACTGGTGG AAACCCAGAA ATGTTAGAGA GACTCTATGG GGCAGGCTGG GACATTAACG GCATAATCAA CGACATGATT AAGGACAGGA AACTAGACAT TATGGTGAAA ACCCTAGACA GGGAGCAGGT GCAGATACTA AGGCGGGCCA TTGAGGACCC AGATGTGATT TATGATGAGG CGGCTAGGGC TATGCCGCTA ATGGATAAAT TAATCGAGAA TAACCTAATC ATCAGGATAT GGTACAGGGA GCAAAGGGTG TGGATCGATC AACCACCTGA AAAAGACCCA GAACTGGGCA TAGGCACCCA CTTCGCCTGG CAGACGCCAA TGCACAGGGA GGCCGTGAGG AGGGTGCTGG GCAATGAACT TGAAAGGCAT AGATGA
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Protein sequence | MKRVKLRFAD REVEFVDREV AIRQIEELAG KGTWWPLVIY GPEGCGKSAL LKQAIEVLRE YGYEVSYISP LSRSGEDRFT LTEGLRRLVT GVGSLLIGDA SRLINIAVEL LYDAVRKRLT GRIALLADDV FQAIGLDKAE LLVKGLLNMV EYPSVDYEKI VILVSSSEGI TWERIGRHRW AEIKIMWSMP KEGFRQLYEQ VPGPKPDFEQ VWRWTGGNPE MLERLYGAGW DINGIINDMI KDRKLDIMVK TLDREQVQIL RRAIEDPDVI YDEAARAMPL MDKLIENNLI IRIWYREQRV WIDQPPEKDP ELGIGTHFAW QTPMHREAVR RVLGNELERH R
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