Gene Cmaq_1429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1429 
Symbol 
ID5709325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1509703 
End bp1510542 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content44% 
IMG OID641275939 
Producthypothetical protein 
Protein accessionYP_001541244 
Protein GI159041992 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0126799 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.00107655 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGGACTA GCCTAGTGGC CGTAGCCTTG GCGATGGTGG TCTTATTAAC CATACTGATT 
GCTGTATCAA TGGCGCCCAC TAACATACCT TATGATGTCA ATAACCCCAA TTGGGATGGT
TACTCCAGGG CCTCAGCCCT ATGCGGGTTT AAGCAATTAT ACGGCTTGAG TAATGTGAAT
AATGCATCAT TATTAATCCT GATACCGCAG ACGCCTCCAT CCGCTCGATT AATTAATGAG
TTAAGGGGCT TCTTGACTAA TGGTGGTTGG TTAGTAGTGT TGAGTAATGG TTTAATGTAT
GGGAACGCGG TTTTAAGCGG GCTCCACGTT AACGTGACTA TTGGTGGTGG CGTTATTACG
GATCCATTGT TTAACCTAGG TAACCCCTAC GTGATAATAG GTACTGTGGT TAATACTACT
ATTGTTAATG AGTCATTAAC CGTAGTCCTA GATAATGCGT CACCAATAGT GGTTTCAGGT
GGCGCCACTG TTATGGCTTA TTCAAGCCAA TCCAGCCTAG TCTCCTCAAC TGTGGGGCCT
TACCCAGTCA TGGTTTATGT TAAGTACGGT AGGGGTTACT TGATTGTTGC CTCAACGCCA
TCAGTCTTCA TGAATTCACT CATTGGTGAA TTCAATAATT CCCAACTCCT AAAGGCGTTA
TGCGTTAATA GGACTGTGGG GTTCCTTGAG CCACTGTTAG CCAATAACCC CCAGTTGAGG
CTTAGGGGAT TCTTCATTGA GGCCTACGCC TACTTAAGTC TAAGGCCTGT GAACTACATT
ATGGTTATGG CTCCATTAAT CATAGCCTCA TTGGCTTTGG CAAAACATAA AAACACTTAA
 
Protein sequence
MRTSLVAVAL AMVVLLTILI AVSMAPTNIP YDVNNPNWDG YSRASALCGF KQLYGLSNVN 
NASLLILIPQ TPPSARLINE LRGFLTNGGW LVVLSNGLMY GNAVLSGLHV NVTIGGGVIT
DPLFNLGNPY VIIGTVVNTT IVNESLTVVL DNASPIVVSG GATVMAYSSQ SSLVSSTVGP
YPVMVYVKYG RGYLIVASTP SVFMNSLIGE FNNSQLLKAL CVNRTVGFLE PLLANNPQLR
LRGFFIEAYA YLSLRPVNYI MVMAPLIIAS LALAKHKNT