Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1429 |
Symbol | |
ID | 5709325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 1509703 |
End bp | 1510542 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641275939 |
Product | hypothetical protein |
Protein accession | YP_001541244 |
Protein GI | 159041992 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0126799 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.00107655 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGGACTA GCCTAGTGGC CGTAGCCTTG GCGATGGTGG TCTTATTAAC CATACTGATT GCTGTATCAA TGGCGCCCAC TAACATACCT TATGATGTCA ATAACCCCAA TTGGGATGGT TACTCCAGGG CCTCAGCCCT ATGCGGGTTT AAGCAATTAT ACGGCTTGAG TAATGTGAAT AATGCATCAT TATTAATCCT GATACCGCAG ACGCCTCCAT CCGCTCGATT AATTAATGAG TTAAGGGGCT TCTTGACTAA TGGTGGTTGG TTAGTAGTGT TGAGTAATGG TTTAATGTAT GGGAACGCGG TTTTAAGCGG GCTCCACGTT AACGTGACTA TTGGTGGTGG CGTTATTACG GATCCATTGT TTAACCTAGG TAACCCCTAC GTGATAATAG GTACTGTGGT TAATACTACT ATTGTTAATG AGTCATTAAC CGTAGTCCTA GATAATGCGT CACCAATAGT GGTTTCAGGT GGCGCCACTG TTATGGCTTA TTCAAGCCAA TCCAGCCTAG TCTCCTCAAC TGTGGGGCCT TACCCAGTCA TGGTTTATGT TAAGTACGGT AGGGGTTACT TGATTGTTGC CTCAACGCCA TCAGTCTTCA TGAATTCACT CATTGGTGAA TTCAATAATT CCCAACTCCT AAAGGCGTTA TGCGTTAATA GGACTGTGGG GTTCCTTGAG CCACTGTTAG CCAATAACCC CCAGTTGAGG CTTAGGGGAT TCTTCATTGA GGCCTACGCC TACTTAAGTC TAAGGCCTGT GAACTACATT ATGGTTATGG CTCCATTAAT CATAGCCTCA TTGGCTTTGG CAAAACATAA AAACACTTAA
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Protein sequence | MRTSLVAVAL AMVVLLTILI AVSMAPTNIP YDVNNPNWDG YSRASALCGF KQLYGLSNVN NASLLILIPQ TPPSARLINE LRGFLTNGGW LVVLSNGLMY GNAVLSGLHV NVTIGGGVIT DPLFNLGNPY VIIGTVVNTT IVNESLTVVL DNASPIVVSG GATVMAYSSQ SSLVSSTVGP YPVMVYVKYG RGYLIVASTP SVFMNSLIGE FNNSQLLKAL CVNRTVGFLE PLLANNPQLR LRGFFIEAYA YLSLRPVNYI MVMAPLIIAS LALAKHKNT
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