Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1426 |
Symbol | |
ID | 5709322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1506555 |
End bp | 1507421 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641275936 |
Product | dTDP-4-dehydrorhamnose reductase |
Protein accession | YP_001541241 |
Protein GI | 159041989 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.41063 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.00349813 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATAATAC TTGTGACTGG GGTTAGTTCA TCACCGGGCT ATAAGACTGC TGTTAAATTG GCTGGGATTC ATGAGGTTAT TGGTGTCTAT AATGAGCACC CTGTTAATGT GCCTAATGCC ACTGTGGTTA AGGCTGATTT AACTAAGGAT GCCTCAAGGT TGATTAATGA ATATAAGCCC AATGTAGTTA TTCACACGGC TGCCGTGGGT AATGTTGACC AGTGTGAGGA TCAACCTGAC TTATGCTATA GGGTTAATGT TGAGACCTCA AGGATACTCC TCAGGGAGGC TTATAGGGTT GGTTCAGCAA TATACTACTT ATCAACGGAC TACGTCTTCG ATGGTGAGAG GGGACTGTAT AATGAGGATG ATGCCCCAAG GCCAATTAAC TACTACGGTT TAAGTAAGCT ATTGGCCGAG GAGATAACTA GGGCCCTGGG TGGCTCAATT ATTAGGGTTG CCTGGGTTTA CGGCACTGGG CCTGGTAGGG TGAATTTCGG TAGGACTGTG GTTGAGAAGC TTTCAAGGGG TGAGGTGGTT AATGCCATTA TTGATCAGTG GTCTTCACCA ACATTAAACA CCATAATTGG TGAGGCAATG CTTAGGCTAG TGGAGTCAAG GTTCACTGGG GTTCTTCACG TAACCGGCCC TAGGATGAGT AGGTTTGATT TCGCTAAGGC CATAGCCAGG TACTTTAAGT TTAATGAGGA TTTGGTTAAA CCAATTAGGC TGAGTGATGT TAATTATAAG GCTAGGAGAC CGAGGGATAG TAGCTTAAGC AATAAGAGGG CTTTAGGCAT CTTGAACATA CCGTTGAATG ACATAGATTA CGCATTATCA ATATTCAAGA GTGAACTAGG CATCTGA
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Protein sequence | MIILVTGVSS SPGYKTAVKL AGIHEVIGVY NEHPVNVPNA TVVKADLTKD ASRLINEYKP NVVIHTAAVG NVDQCEDQPD LCYRVNVETS RILLREAYRV GSAIYYLSTD YVFDGERGLY NEDDAPRPIN YYGLSKLLAE EITRALGGSI IRVAWVYGTG PGRVNFGRTV VEKLSRGEVV NAIIDQWSSP TLNTIIGEAM LRLVESRFTG VLHVTGPRMS RFDFAKAIAR YFKFNEDLVK PIRLSDVNYK ARRPRDSSLS NKRALGILNI PLNDIDYALS IFKSELGI
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