| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1423 |
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| Symbol | |
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| ID | 5709293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 1502617 |
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| End bp | 1503327 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641275933 |
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| Product | bacterio-opsin activator |
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| Protein accession | YP_001541238 |
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| Protein GI | 159041986 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3413] Predicted DNA binding protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.487577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0402926 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTACATCA ATAGTGATAG ATTAACTTAT GTGGAACTCA GTTTAATTCA CTTATCCGAC
TGGACCTCAA GGGTTAACTT TGATTATGAG TATGTTGTCA TGAAATCTGA TATTAATGCA
TTGAGGGGTT ACTCCCTTGA ATTCTCAATA CTCAAGGTTA GGGATAAGGA TTCATTGAAG
AGAATAATGC GCATTATTAG GAGTAGTGAC GCAATAATTG ATGTAGTTGG GTTCAGGGAA
TTGAATTATG GGTACCCTAA GAGAATTGCC ATCGTGTTGA AGAACAGTTT AAATGACTCC
ACTAGGTATA AGGCATGGCA GCTAAGTGGT TTTGAGACTA AGGATCACAT AGTTAATGGT
ATTGAAAACT GGGGTTTCAT ATTCATGAAT AAGGATTCCA TTGAAACCTT TAGGAGACAA
TTAGAAGACA GTGGTAGAGT ATTATCCTTC AGGGTTAGGG ACATTGATTT AAACGACGCA
TTTAACCTGG TTAACTCTAG GAGTATTCAC GCATTATTAA CTAAGAACGA ATTAAAAGTA
CTCAAGGCTG CCCATAAAGG CGGCTTCTTC GATGAACCTA GGGGAATTAA CCTAATTAAC
CTAAGTAAAG CACTTAACCT ATCCCCATCA ACTGTTAACC ACGAGTTAAG GAACGCCCTA
CGTAAGTTGC TTAGCCAATA CCTTGGGCTT AACCAATACC CATATGAGTA G
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| Protein sequence | MYINSDRLTY VELSLIHLSD WTSRVNFDYE YVVMKSDINA LRGYSLEFSI LKVRDKDSLK
RIMRIIRSSD AIIDVVGFRE LNYGYPKRIA IVLKNSLNDS TRYKAWQLSG FETKDHIVNG
IENWGFIFMN KDSIETFRRQ LEDSGRVLSF RVRDIDLNDA FNLVNSRSIH ALLTKNELKV
LKAAHKGGFF DEPRGINLIN LSKALNLSPS TVNHELRNAL RKLLSQYLGL NQYPYE
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