| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1422 |
|---|
| Symbol | |
|---|
| ID | 5709292 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | + |
|---|
| Start bp | 1501486 |
|---|
| End bp | 1502493 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641275932 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001541237 |
|---|
| Protein GI | 159041985 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.653598 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.0170748 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTAACG TGGGTAGGAT TAAGCTTAGT TTTGCGGGTA TTCGAGTTGA TTTCGTTGAT
AGGGAGTGGG CTCTTAGGCG TATTGAGAAA TGGGCTGAGG GAGGTACTTA TCCCGTTCAG
GTTGTTTATG GTCCTGAGGG TTGTGGTAAG ACTGCTTGGC TTAGGCAGTC TGTGGAGTTG
CTTAGGGGTT TGGGTTTTGA TGTTGTTTAC GTTAATCCAA TTAATAGGGA GTTTTTAACG
GGATTCAATG TTTTGAGGGA TAGGTTCCTT GCCGTTATTA AGGAGACTAT TAGCCAGGAT
GCGTTAGGTA GATTGGTTTG GTTAGCCTTC GATGTGGCTA AGGAGTTGAT TAAGGTTACT
AGGGGTAGGG TGGCTGTTAT TGTTGATGAT GCATTCCAGG TAATTGGGGT TAAGGAATCA
ACACTCTACG TTAAAGCACT ACTAAACCTA ATAGAATACC CACCAGAACA ATACGAAAAA
ATAGTGGCCG TAACCGCTAC CAGTGAGGGA GTCTCGAAGA GTGAGATTGG TAGGCATAGG
TGGGCGAATT TACTAACAAT GTGGAATATG ACTAAGGATG GTTTTAAGGA GCTTTATGAT
CAAATACCAG GCGATAAACC AAGTCTTGAG GAATTATGGA AACTAACTGG GGGAAATCCA
TGGATGCTTG AAATGCTCTA TGAGGCCCAC TGGAGTGTTG ATCAAGTGGT TAATAGGATT
ATTAGGAGTA AGGGGTTGAT AAGCTTCATT CAATCACTCA GTGAAAACGA TAAGAAACTG
CTTATGAAGG CATTAGAGGA CCCGGACACA CTCATGAGTA GGGATGGGGT AATGCTCATG
AATAAGTTAG TGGAGTTGAA CCTAATAATC GACAACATAT ACCCCAGGGA CGAGTACCTA
TGGGTGGATT CACCACCACC TGAGAGGGAT AATGAACTAG GTATTGGTAA GTATACGGCA
TGGCAAAGCC CACTCCACAG GGAGGCTGTA AGGAGGGTAT TAAGTTAA
|
|---|
| Protein sequence | MINVGRIKLS FAGIRVDFVD REWALRRIEK WAEGGTYPVQ VVYGPEGCGK TAWLRQSVEL
LRGLGFDVVY VNPINREFLT GFNVLRDRFL AVIKETISQD ALGRLVWLAF DVAKELIKVT
RGRVAVIVDD AFQVIGVKES TLYVKALLNL IEYPPEQYEK IVAVTATSEG VSKSEIGRHR
WANLLTMWNM TKDGFKELYD QIPGDKPSLE ELWKLTGGNP WMLEMLYEAH WSVDQVVNRI
IRSKGLISFI QSLSENDKKL LMKALEDPDT LMSRDGVMLM NKLVELNLII DNIYPRDEYL
WVDSPPPERD NELGIGKYTA WQSPLHREAV RRVLS
|
|---|
| |