| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1417 |
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| Symbol | |
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| ID | 5709303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 1495939 |
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| End bp | 1497033 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641275927 |
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| Product | radical SAM domain-containing protein |
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| Protein accession | YP_001541232 |
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| Protein GI | 159041980 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
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| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.111618 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTGCACCA TTAATGATGT TAGGAACGCG GTTGCCAATG GGGTTAGTAA AACAGCTGCC
TTAAGCCTAT TCACTCAATG CGACTTCAGG TTGCTGGCTA AGGTGGCTGA TGAATTAACA
ATGAAGATCA CCGGGGACAC GGTTACCTTC GTTAATAACG TGGTTATTAA CTACACTAAC
GTATGCGTGG CTCAATGCCC AATATGCGCC TTCTATAGGC TTAAGGGTCA TCCTGAAGCC
TACCTGAGGA GTCCCCAGGA GGTTGTTAAG GGTGTTCTTG AGGCTAGGGC TAATTACGGG
GTTAGTGAAC TCCACATTAA CGGTGGCTTT CACCCAGACT TAACCATAGA GTACTTTGAG
GAGTTATTCA GCAGTGTTAA GAAGGCTGCA CCGGAGATTA CTATTAAGGG GCCTACTGCC
GCTGAGGTGG ATTTCTACGC TAAGATTTGG CGCATGAGCA CTAGGGAGGT TCTTGAGAGG
CTTAAGGAGG CTGGGTTAGA CGCATTATCA GGGGGTGGGG CTGAAATCCT CAGTGAGGAT
GTTAGGAAGA TTATTACCCC ATATAAGTTT AATGCCGAAG CCTGGTTGAG GATTTCCCAT
GAGGCCCATG AATTGGGTTT AAGGAGTAAT GCAACAATGA TGTATGGGCA CGTGGAGGAG
CCCCACCACA TAATAGACCA CTTATTCTCA ATAAGGAGGC TTCAGGAGGA GACCAATGGC
ATACTACTCT TCATACCCAT TAAGTTCGTT CCATGGAATA CAAGGCTCTA TAAGGATGGA
TTAGTTAAGG GTCCTGCACC CACTGAACTG GATGTTAAGG TTACTGCAAT ATCAAGGATT
GTGCTTGGGG GCGTTATTAA GAGGATTGGG GCCTACTGGA CCTCAGTGGG TAAGAGGATT
GCCTCAACAC TCCTACTGGC TGGGGCTAAT GACTTAGTTG GAACCATGAT TAATGAACAA
GTGCTTAGGC AAGCCGGCTC AGGCGACGCC TTGAAGCCAA CCACCGTGGC TGAGTTGGCT
CACATTGCTA GGGAGGTTGG TAGGAGGCCT ATGGTTAGGG ACACATTCCA CACAAGGCTC
ATTGAGGTGA ATTAA
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| Protein sequence | MCTINDVRNA VANGVSKTAA LSLFTQCDFR LLAKVADELT MKITGDTVTF VNNVVINYTN
VCVAQCPICA FYRLKGHPEA YLRSPQEVVK GVLEARANYG VSELHINGGF HPDLTIEYFE
ELFSSVKKAA PEITIKGPTA AEVDFYAKIW RMSTREVLER LKEAGLDALS GGGAEILSED
VRKIITPYKF NAEAWLRISH EAHELGLRSN ATMMYGHVEE PHHIIDHLFS IRRLQEETNG
ILLFIPIKFV PWNTRLYKDG LVKGPAPTEL DVKVTAISRI VLGGVIKRIG AYWTSVGKRI
ASTLLLAGAN DLVGTMINEQ VLRQAGSGDA LKPTTVAELA HIAREVGRRP MVRDTFHTRL
IEVN
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