| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1416 |
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| Symbol | |
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| ID | 5709312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 1494760 |
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| End bp | 1495836 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641275926 |
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| Product | radical SAM domain-containing protein |
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| Protein accession | YP_001541231 |
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| Protein GI | 159041979 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
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| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.150894 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTCAGG CATTGGAGAA GGCCCTTAGT GGTGAAGAGT TGAAGCCCCC TGATATTGAG
GAGCTTCTTG AATTAAACCT ATGGGACCTA GGCATCGCTG CAGGGGAGTT AACTAGGAGG
TTGTTTAATG GTGTGGTGAC CTTCATACCC AATCTAATAC TGAACTACAC CAACGTCTGC
ACAATAGCCT GCAGCTTCTG CGCCTTCTAT AGGCCACCTA GGCACCCTGA GGCATACACC
ATGAGTGTGG ATTACGCCGT TAAGCTTGTT ACAGAGGTTG ATTCAAGATT CGGTATTAGG
CAGGTTCTAG TGCAGGGTGG TATTAATCCT GAATTAGGCA TTGAGTACTA CGAGGAATTA
TTCAAGACCC TTAAGGCTAA GCTACCCCAC GTGGCTATTC ACGGTTTAAG CCCCATTGAG
GTTGATTACC TAGCTAGGAA GCATAGAATG AGTTACAGGG AGGTTCTTGA GAGGCTTAAG
GCAGCTGGAA TGGATACGCT AGCTGGGGGT GGCGGGGAGA TTCTGGTGGA TGAGGTTAGG
AGGATTATTG CACCACATAA GATTAGTGCT GAAACCTGGT TGAGAGTAAT GGAGATTGCC
CACGGGTTAG GCATAATGAG TAACGCAACA ATGATGTACG GGCACGTGGA GTCTAAGGCG
CATTGGGCTG AGCACCTATA CAGGATTATT AGCCTACAGA GGAGGACTCA TGGATTCCTA
TCCTTCACCG CGTGGAATTT CGAGCCAGGT AACAGTGAGT TAACTAATAA GGTTCCTTAC
CCATTAACAT CAGCCACATT ACTGAGGGTG GTTGCCGTGG CTAGGCTTGT GTTTAAGGGT
GAGTTACCTA ATATTCAATC AAGTTGGTTA ACTAATGGTC TTGATACTGC TCAATTAGCC
CTCAAATTCG GTGCAAACGA CTTCGGTGGA ACACTATACG AGGAGAGAGT AATACCAGCA
ACCGGGTTAA GTAAACCAGT ATTCACAAGG GATTACGTAA TCAACATGAT TAGAAGCCTA
GGATACAAAC CAGCGGAACG CGACAACTGG TATAGGGTGT TAAAACTATA CGACTAA
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| Protein sequence | MSQALEKALS GEELKPPDIE ELLELNLWDL GIAAGELTRR LFNGVVTFIP NLILNYTNVC
TIACSFCAFY RPPRHPEAYT MSVDYAVKLV TEVDSRFGIR QVLVQGGINP ELGIEYYEEL
FKTLKAKLPH VAIHGLSPIE VDYLARKHRM SYREVLERLK AAGMDTLAGG GGEILVDEVR
RIIAPHKISA ETWLRVMEIA HGLGIMSNAT MMYGHVESKA HWAEHLYRII SLQRRTHGFL
SFTAWNFEPG NSELTNKVPY PLTSATLLRV VAVARLVFKG ELPNIQSSWL TNGLDTAQLA
LKFGANDFGG TLYEERVIPA TGLSKPVFTR DYVINMIRSL GYKPAERDNW YRVLKLYD
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