Gene Cmaq_1412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1412 
Symbol 
ID5709308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1490109 
End bp1491296 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content45% 
IMG OID641275922 
Productsodium/hydrogen exchanger 
Protein accessionYP_001541227 
Protein GI159041975 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.179509 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTTG GTTCAATATA CTTAACGCTA CTGGAGTTCG CAATACTAGT AACCACTGCA 
GAATCCCTCA GCCTAATCCT AGCCAAGTAC AAGTACCCGA GTATTGTGGC AGAGTTACTG
ACTGGTATAG CATTAAGCCC ATATGCCCTA GGCGGGTTAC TTAACGCCTT ACTCCACGTT
GACTTATTCT CAATAAACAA CTACGTGGTG TTTCTATCCG AGTTCTCAGT AATACTCCTC
CTATTCGCCT CAGGGCTTGG GCATGGATTA TCCTCACTTA AACAGGGTGG ATTCCCTGGG
TTAATGGCTG CTGTAGCCGG TGCCATATTA CCCTTCATGA CTGTTTACTG GTACTGCACT
AGTGTTGGTT TTAGTCAAGT GGCTGCATCA CTCATAGCCC TATCAACAGC ACCCACTAGC
CTAGCCGTTG TTGCTAACAT TATTGAGAGG GAGGGGCTTC ATGAACTCCC AAGCACCAAG
GTGCTTGTGG CCGCTGCCTC AGTGGATGAC GTGGTTGCAC TCATACTGCT CTCCACATTA
CCCACAAGTC CCAGCACTGA TTCAGTAGCA GGCTTTACGC TACGTATAGT TAAAATAGCC
GTTCTCTGGG TAATCTTCCT GACTGCATCA ATATTACTTA TACCTAGGTT ACTTAACAGG
ATTAATGAAT ACCTAGTGGT CTACGCATCA CTAATAGTGT TGTTTGGACT AGTGGTTTCA
ATGGTTGCCT CAGGCTTCTC AGCAGTAATA GCATCCTTCA TAGCCGGTGT AGCGGTTGCG
GAAAGCAGGG AGTCAGGTAG GGTTAGGGCG TCTATTGACG CATTATTAGC CATATTTGGT
TCAATATTCT TCATAACCAT AGGCCTCCAA ATGAACTTCA AGACAATAAC CAACTTAACG
ACTATCCTCC AATCCCTAAT AGTATCAGCA ATAGCAATTA TAGCTAAGGT TATTGGAGTT
TACCCATTCG CCTACATTAA GTTAAGGAAC ACATCCGCCT CATTAACAGC ATCACTAGGC
ATGGTGCCTA GGGGTGAAAT GGGGTTGGTG ATCGCCTCAA TAGGCTTATC AAGCAGTCTA
CTAAACCCAA GTGAATACGG CTTAATACTA ATAATGGTTC TTGCAACCAC AATAATTGGT
TCAATACTAT ATAGGAGGAG CATTAGGCTT AACATTGAGG GGAATTAA
 
Protein sequence
MAVGSIYLTL LEFAILVTTA ESLSLILAKY KYPSIVAELL TGIALSPYAL GGLLNALLHV 
DLFSINNYVV FLSEFSVILL LFASGLGHGL SSLKQGGFPG LMAAVAGAIL PFMTVYWYCT
SVGFSQVAAS LIALSTAPTS LAVVANIIER EGLHELPSTK VLVAAASVDD VVALILLSTL
PTSPSTDSVA GFTLRIVKIA VLWVIFLTAS ILLIPRLLNR INEYLVVYAS LIVLFGLVVS
MVASGFSAVI ASFIAGVAVA ESRESGRVRA SIDALLAIFG SIFFITIGLQ MNFKTITNLT
TILQSLIVSA IAIIAKVIGV YPFAYIKLRN TSASLTASLG MVPRGEMGLV IASIGLSSSL
LNPSEYGLIL IMVLATTIIG SILYRRSIRL NIEGN