| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1394 |
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| Symbol | |
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| ID | 5709452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 1472612 |
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| End bp | 1473337 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641275905 |
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| Product | Asp/Glu racemase |
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| Protein accession | YP_001541210 |
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| Protein GI | 159041958 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3473] Maleate cis-trans isomerase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTGGATTA AACTGGGCAC TATTATTCCA TCATCAAATA CCACAGTAGA GAGGGAATTC
ACGAGAACTA TACTTGAGCC TGATGTTACA GTGCATACAT CACGAATAAC ATTGAAGGAA
GTCACGTTAA ATGGCCTTAA GGAAATGGAG AGGGAAACAG AGCGTGCAGC TCAGGAATTA
GGCACTGCGA AGGTAAATAT AATAGCCTAT GCATGCACCA CAGGGAGTTT ATTCAAAGGC
CCCAATCATC ATCTAGAGAT TAAGCGTAGA ATTGAAGATA TAACTGAAAT ACCAGCCGTA
GCCACATCTG GCGCCGTAAT AGATGCCCTT TCTTATTTTA ATGCACGTAA AGTATTGGTG
GTTACGCCAT ATATTGATGA ATTGAATGTT AAGGAAAGGG AGTTTCTTGA AGCCCATGGC
ATCCAAGTAG TGAGTATAAA GGGACTCGGT ATCTCCGATA ATACAGTGAT TGGATCCCTG
GACCCCAGCA TTACCTATGA GACTGCATTA AATGAGGCAC GGAGATTTGG CTCTGATTAT
GACGCATTAT TTATTTCCTG CACTAATTGG CGTAGCTTCG AAGTAATAGG TGATCTTGAA
AGGCAATTAG GTAAACCAGT GATTAGTAGT AATAGCGCCA CACTATGGGC TGTAATAAGA
AACCTAGGTA TCAAGGTTAA ATTAAGGTAT AATTTAGGAG CATTATTTAG TGACTTAACA
TTATGA
|
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| Protein sequence | MWIKLGTIIP SSNTTVEREF TRTILEPDVT VHTSRITLKE VTLNGLKEME RETERAAQEL
GTAKVNIIAY ACTTGSLFKG PNHHLEIKRR IEDITEIPAV ATSGAVIDAL SYFNARKVLV
VTPYIDELNV KEREFLEAHG IQVVSIKGLG ISDNTVIGSL DPSITYETAL NEARRFGSDY
DALFISCTNW RSFEVIGDLE RQLGKPVISS NSATLWAVIR NLGIKVKLRY NLGALFSDLT
L
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