| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1392 |
|---|
| Symbol | |
|---|
| ID | 5709426 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | - |
|---|
| Start bp | 1469888 |
|---|
| End bp | 1471861 |
|---|
| Gene Length | 1974 bp |
|---|
| Protein Length | 657 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641275903 |
|---|
| Product | 5-oxoprolinase (ATP-hydrolyzing) |
|---|
| Protein accession | YP_001541208 |
|---|
| Protein GI | 159041956 |
|---|
| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.307503 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTTGTA TGGTTATTGT TGCTGTTGAT GTTGGTGGTA CTTTTACGGA TTTCGTTACT
TTAAGTGATG ACGGTTCAAT AGAATCCTTT AAGGTTCTTA GTACACCTAG GAATCCTGAG
GCAGCAGTAT TAGGGGGTCT TAGGAGGATT AATGCCCGTA TTGATGAGGT CCTGCATGCA
ACCACAATTG GGACAAATGC CCTATTGGGT CAGGTGGGTC TTGAGTTGCC TAAGGTTGCC
TTATTCACCA CTAAGGGTTT TAGGGATGTT ATTGAGATTG GGCGTCAGAA TAGGCCTAGG
CTCTATGACT TATTCTTCGA GAAGCCTAAG CCCCTTGTAC CCAGGGAGCT TAGGTTTGAG
ATTGAGGAGA GGACGTTAGC TAACGGTGAG GTGGTTAAGG AGGTTAACCC ACGTGAGGTT
GAGGAGTATG CTGTTAAGGC TAAGTCCCTT GGCGTAAACT CAGTTGCAGT ATCTTACCTG
CACTCATACA TTAATCCACG TAATGAGGAG ATTACAGGCA GTGTATTAGG CAGGTACTTT
AACTACGTAG CCTTATCAAG TAAAATTGCC CCAGAGCCTA GGGAGTATGA AAGAACCTCC
ACAGCGGTCG TTAATGCTGC CTTAATGCCC ATTGTTAGCC AGTACATTAA TGAGTTTTCC
AAGGGCCTTA GGGAGCTGGG TATTGATAAG TTCTTCATAA TGTCCAGTTC AGGAGGCCTA
GTGGATAGTG ATGAAGCCAC TCAGAGGCCT GTTCAATTAA TTGAATCAGG CCCAGCAGCC
GGCGCCGTGG CCGCTGCGGA ATTCTCAAGG ATTATTAGTG TTAGGAATGT TATTGGATTC
GACATGGGTG GGACCACGGC GAAGGCATCA TCCATAGTTA ACCATGAACC CGAGGTAACC
ACGGAGTATG AGGTCGGCGG TGAGGTTCAC CATGGGAGAC TAGTTAAGGG CAGCGGTTAC
CCGGTGAGAT TCCCATTCAT AGACCTTGCT GAAGTATCCT CAGGTGGTGG TACAATTATT
TGGCGTGATG AAGCCGGCGC CTTAAGGGTT GGGCCATTGA GCGCGGGTGC TGATCCTGGG
CCAATATGCT ACGATAAGGG TGGTGTGGAG CCAACGCTCA CTGATGCTAA CCTAGCCCTA
GGTAGAATTG GGGATTACCT CCTTGGTGGT GAAATGAAGC TGAATAAGGA AGGCGCCATC
AAAGGGCTGC GTAGACTGGG TGATCCAATT GATGTTGCTC TCAACGCCAT TAAACTCGCT
AATATTGAGA TGGCCAGGGC AGTGAGGCTT GTTACAGTGG AGAGGGGGCT TAATCCAGGG
GATTTTGCAT TAATGGCATT CGGTGGTGCT GGTCCCCAGC ACTCTGCTGA GATTGCTGAG
GAATTAGGGG TAAGCACCAT TATTGTGCCA CCGGAGCCTG GTGCTTTTTC CGCTCTTGGT
TTATTAATGG CTGATGAGAA GTTTGAGGTG AGGATGTCGT ATCCAAGGGA TTTAGAGGAG
GGTTTTATGA AGCTGGAGGA TGAGTTAAGC CAGAGGCTTG GCAAGGTGTC TTACTTCCTC
AGGTACGCTG ACGTTAGGTA CAGGGGGCAG GGCTGGGAAT TAACCATACC AGTGAATAGG
CCTGCTAGGA TTGAGGACGT GGAGAGGACC TTTAATGATA AGCACCAGGC AACCTACGGG
TTTAGGTTGA GTAAGCCTAT TGAGGTTGTT ACCATAAGGG TCTTCGCGGT GGTAACAAGG
TTGAAGCCTA GGTTCAAGGT GAAGAACCTG GGGGGTGAGG CTAAGCCAAG GGGCTTTAGG
AGAGTCTTCT TTAATGAGTG GGTTGAAGCA CCCGTTTACT GGCGTGGCGA CATACCCATG
GGGCAGGTGA TTGAGGGACC AGCCGTAATT GAGGAGTATG GTTCAACAAT AGTGGTGCCG
CCTAGGTGGA GGGCTGAGGT TGGTGGGAAT GCGGAGGTGA TTATGAGGAG GTGA
|
|---|
| Protein sequence | MGCMVIVAVD VGGTFTDFVT LSDDGSIESF KVLSTPRNPE AAVLGGLRRI NARIDEVLHA
TTIGTNALLG QVGLELPKVA LFTTKGFRDV IEIGRQNRPR LYDLFFEKPK PLVPRELRFE
IEERTLANGE VVKEVNPREV EEYAVKAKSL GVNSVAVSYL HSYINPRNEE ITGSVLGRYF
NYVALSSKIA PEPREYERTS TAVVNAALMP IVSQYINEFS KGLRELGIDK FFIMSSSGGL
VDSDEATQRP VQLIESGPAA GAVAAAEFSR IISVRNVIGF DMGGTTAKAS SIVNHEPEVT
TEYEVGGEVH HGRLVKGSGY PVRFPFIDLA EVSSGGGTII WRDEAGALRV GPLSAGADPG
PICYDKGGVE PTLTDANLAL GRIGDYLLGG EMKLNKEGAI KGLRRLGDPI DVALNAIKLA
NIEMARAVRL VTVERGLNPG DFALMAFGGA GPQHSAEIAE ELGVSTIIVP PEPGAFSALG
LLMADEKFEV RMSYPRDLEE GFMKLEDELS QRLGKVSYFL RYADVRYRGQ GWELTIPVNR
PARIEDVERT FNDKHQATYG FRLSKPIEVV TIRVFAVVTR LKPRFKVKNL GGEAKPRGFR
RVFFNEWVEA PVYWRGDIPM GQVIEGPAVI EEYGSTIVVP PRWRAEVGGN AEVIMRR
|
|---|
| |