| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1388 |
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| Symbol | |
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| ID | 5709393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 1464786 |
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| End bp | 1465337 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641275899 |
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| Product | transcription factor TFIIE, alpha subunit |
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| Protein accession | YP_001541204 |
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| Protein GI | 159041952 |
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| COG category | [K] Transcription |
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| COG ID | [COG1675] Transcription initiation factor IIE, alpha subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.299499 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCCTT ACATTGAGTT GGTTAGGAGG TATGTCTATA GGAGGATTCT CATTGAGTTT
GGTGATGATG AGTTAGGTAA GTTGGCTGTG GCCATTTTTA ACACGCTTTT AAGTAGGGGG
GAGGCTATGA CTGATGATAA GTTGACTTCA ATTGTCGGCT ACAATGCTAT TGATGTTAGG
AGGATTCTCC AAGCCCTATA CAATATGAGG CTTGCCTCAG TGGTTGAGGA GTTTAATGAG
GCGGCCGGTA GGATTGAGCA ATCGTGGTCC ATTAAGGATG AGGATATTAG GAGGTTTCTA
ATCAACCTAA TAGGTGGTGT TTTGGATAAG GTTGGTGTAT TAATGCAACA GTTAACAAAT
ACACCCATCT ACATTTGTCC CAAGTGCTTT AAGAGGTATA GTGAGGATGA TGCCTTAATG
TATGATTACA AGTGCCCATT AGACAGGACT CCACTGGAGT ACATTAATCC AGCGGATTAC
TTAACAGTGC TTGGTGCTGT TGAGGCTAGG CTTAAGAAGA TGATGGAGTC CGTCAGTAAG
GGGAGTGTAT AG
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| Protein sequence | MQPYIELVRR YVYRRILIEF GDDELGKLAV AIFNTLLSRG EAMTDDKLTS IVGYNAIDVR
RILQALYNMR LASVVEEFNE AAGRIEQSWS IKDEDIRRFL INLIGGVLDK VGVLMQQLTN
TPIYICPKCF KRYSEDDALM YDYKCPLDRT PLEYINPADY LTVLGAVEAR LKKMMESVSK
GSV
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