| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1383 |
|---|
| Symbol | |
|---|
| ID | 5709316 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | + |
|---|
| Start bp | 1458145 |
|---|
| End bp | 1459074 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641275894 |
|---|
| Product | DNA-cytosine methyltransferase |
|---|
| Protein accession | YP_001541199 |
|---|
| Protein GI | 159041947 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0270] Site-specific DNA methylase |
|---|
| TIGRFAM ID | [TIGR00675] DNA-methyltransferase (dcm) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACTTGT TTTCAGGGGC GGGGGGATTC TCGGTTGGCT TCAGGGATGC TGGTTTTGAG
GTGGTTGCAG GCTTAGACAT TGACATTGAC TCAGTGAGGT CATTCAGCAT TAACTTCCCT
AAAGCAGTAA CAATACGTGA GGACGCTAGG TTAGTTAGGG GTAGTGATAT TATTAAGTAT
GTTGGTGACG TGGACGTGGT GGTGGGTGGA CCACCATGTG AAGCCTACAC TGGGGCTAAT
CCAAGAAGGA TGAGTGATCC ATTGGATAGG CTTTACATGG ATGAGCTTGG TCAATTAACC
CTGGAGTTCA TTAGGCTTGT GGGTGAGTTG AGGCCTAAGG TTTTCGTGAT GGAGAACGTG
GCAGCCATAA CTGAGGGTGG GCTTAAGGAG GCCTTAATCA ATGAATTCAG GAGGGTGGGT
TACGGGGTTA TTCACTTCAA TATACTTCAC GCCGAGGATT ATGGGGTTCC AAGCATTAGG
AGGAGGGTCT TCATATCAAA CATTGTTATT AAGCCACCTA AGGCAGGTAA GGTGATTACT
GTCGCCGAGG CCTTAAGTGG CTTGCCTGAA CCAACACCCC TAATCCCTAA TCATGAACCA
GTCACCGTGT CTGGGAGGAA GATTAAGGGT ATTAGTAGGG TTAATTGGGG GCAAGCCCTA
TACACGTACA GGGGTTCTGG GGGAGTGTAC AGGAACTTCA TTAGGCTTCA CCCAGGTAAA
CCAGCCCCAA CGGTAATGGG TAGTGTCAGG TTTATTCACC CATATGAAGA TAGGTTACTA
ACGGTGAGGG AGCAGGCTAG GTTAATGGGA TTCCCAGACA CCCACGTATT CACCGGTAGT
AAGGATTCTC AATTCAATCA AGTGGGTGAA GCAGTACCAC CACCCTTAGC TAAGGCAATA
GCGGAGGTTG TTAAGCGGGA GTTAACGTGA
|
|---|
| Protein sequence | MDLFSGAGGF SVGFRDAGFE VVAGLDIDID SVRSFSINFP KAVTIREDAR LVRGSDIIKY
VGDVDVVVGG PPCEAYTGAN PRRMSDPLDR LYMDELGQLT LEFIRLVGEL RPKVFVMENV
AAITEGGLKE ALINEFRRVG YGVIHFNILH AEDYGVPSIR RRVFISNIVI KPPKAGKVIT
VAEALSGLPE PTPLIPNHEP VTVSGRKIKG ISRVNWGQAL YTYRGSGGVY RNFIRLHPGK
PAPTVMGSVR FIHPYEDRLL TVREQARLMG FPDTHVFTGS KDSQFNQVGE AVPPPLAKAI
AEVVKRELT
|
|---|
| |