| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1378 |
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| Symbol | |
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| ID | 5709161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 1451562 |
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| End bp | 1452608 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641275888 |
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| Product | putative DNA primase, small subunit |
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| Protein accession | YP_001541194 |
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| Protein GI | 159041942 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1467] Eukaryotic-type DNA primase, catalytic (small) subunit |
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| TIGRFAM ID | [TIGR00335] DNA primase, eukaryotic-type, small subunit, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.214397 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGAAT CCCTCAGGTA CATTGAGGTC TTATTCAAGA ACTACTACAG GAATTACTTC
AAACCCCCTG GTGTACCTAG GATTGAGAAT AGGGAGGTTG CTTACCAGCC CTTCACTGGG
CAATCAATGA TTAGGCACTT GGGTTTCAGG AATTGGAACG ATTTAAGGAG CTTCATTACT
GAGAGGATTC CAAGGAACCT ATACTTATCA AGCGCCTACT TCAACAACCC CTCAGCCGGT
GAAATGGATG CTAAGGGTTG GTTGGGTGCT GACTTAGTGT TTGATATTGA TGGTGATCAC
CTACCCACTG ATAACTGCAG GGGCGTTGAG TTAGTTACCA TTGAGTGTCT TAATGATGCC
TTAAGCGAGG TTGTGAAGTT GATTGATGTG CTGAGGTATG AGTTCGGTAT TGAGGAGAAG
CACCTCAGGG TAACCTTCTC CGGGCATAGG GGTTTTCATG TTCACGTGGA GGGGCCTGAG
GATGTGATTA ATTTAACTCA GGATGAGAGG AGGATGATTG TTGATTACTT AACGGGTAAG
GTTGATTTAA CGAGGCAAAT ACTGGTTAAT AGGGAGGGTA GGGCTACTGT GGTTGAATTA
GGTCCATTTA ACGCTAATCT ACTGGGTAAA GTGTATGGTA GTGTTGGGAG GGTTTTCACA
GAGGCCTCTA AACTGGGTAA GGTTACCGCT GGTTTAGTTA GAGATAGGAG TGAGGATATT
AAGAGTGGCT TAACTGTTCA CATTGATGAG GTTGTTACAA TAGATACTAA TAGGTTAATG
AGAATGCCCA ATAGTCTGCA TGGTAAAACA GGCCTAATAG CCGTGGAGTT GAGTCTAAGT
GACCTTGATA AGGGTATTGA GGCAATAGTG GATAAGGCAG TTGCCTTCAG GAAGGGTAAC
CCAAGGATTA GGTTAACGCA GAGGCTACAG GTTAGTAGGG TGCTTGGTGA AGTAATCCGG
GTTAAGGAGC AGGGCGAGGA GGCCAGTGAA CCAGCCTATG TGGCGGTGTA CTTAATATTA
ATGGGATTAG CGCAATTAGC TGAGTAA
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| Protein sequence | MDESLRYIEV LFKNYYRNYF KPPGVPRIEN REVAYQPFTG QSMIRHLGFR NWNDLRSFIT
ERIPRNLYLS SAYFNNPSAG EMDAKGWLGA DLVFDIDGDH LPTDNCRGVE LVTIECLNDA
LSEVVKLIDV LRYEFGIEEK HLRVTFSGHR GFHVHVEGPE DVINLTQDER RMIVDYLTGK
VDLTRQILVN REGRATVVEL GPFNANLLGK VYGSVGRVFT EASKLGKVTA GLVRDRSEDI
KSGLTVHIDE VVTIDTNRLM RMPNSLHGKT GLIAVELSLS DLDKGIEAIV DKAVAFRKGN
PRIRLTQRLQ VSRVLGEVIR VKEQGEEASE PAYVAVYLIL MGLAQLAE
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