| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1377 |
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| Symbol | |
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| ID | 5709160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 1450795 |
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| End bp | 1451562 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641275887 |
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| Product | proliferating cell nuclear antigen PcnA |
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| Protein accession | YP_001541193 |
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| Protein GI | 159041941 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00590] proliferating cell nuclear antigen (pcna) |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.163855 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGATAG TGCTTGTGAG CAGTGTTAAG TTAACTTACC CTGATGGTAA GGAGTGGTAC
TTGATAATGG ATGCAGTGGC GGTACTGGTT GAGGAGTCTG CCTTAACGGT AACTAAGGAT
GGGGTTAAGC TTAGGGCCCT TGACCCATCC AGGACGGCAA TGGTTGACTT ATACATGCCT
AGGACTGCCT TCGACGAGTA CCCTGACGTG GAGCAGGACA TTAACATTGG CGTTAACTTC
AGTGAGGTTA AGAAGATACT GCAGAGGGCT GGCAAGGGTA GTAGCGTCAC CTTTGAGGTT
GAGGAGAATA GTCTTAAAAT AAGAATGAGT GGTAAGGTAA CTAGGACTAT TAAACTACCC
CTAATAGACA TTCCCGTTGA ACAATTACCA ACACCTAAGG TCATCTTCAC GGTTACGGCT
AAGTTAGCTA GTGATGCCTT GAGACAGGCG GTGAAGGATG TGGAGGTTAT TGCTGATGCA
GCTAAGTTTG AGGGTAAGGA GGATGGCTTA TACATTAGGG CTAGTAGCGA TAGGGGTGAG
ACTGAGATTA AGTTTGATAA GGGTGGGGAG GTGTTGTTTG AGTATGATAA TAAGGAGACG
GCTACGGCGA CGTATAGTGT TGATTACTTA TCCGATATCG TTAATAGGGC TTATCAAATA
AGCGACATAG TCACCGTGGA GTTCGCCACC CAGAAGCCCC TGGCTTTAAC CTTTGAAATA
TCGGGTGGTG GCACATTGGC GTACTTCGTA GCCCCAAGGA TAGAGTAA
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| Protein sequence | MVIVLVSSVK LTYPDGKEWY LIMDAVAVLV EESALTVTKD GVKLRALDPS RTAMVDLYMP
RTAFDEYPDV EQDINIGVNF SEVKKILQRA GKGSSVTFEV EENSLKIRMS GKVTRTIKLP
LIDIPVEQLP TPKVIFTVTA KLASDALRQA VKDVEVIADA AKFEGKEDGL YIRASSDRGE
TEIKFDKGGE VLFEYDNKET ATATYSVDYL SDIVNRAYQI SDIVTVEFAT QKPLALTFEI
SGGGTLAYFV APRIE
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