| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1375 |
|---|
| Symbol | |
|---|
| ID | 5709870 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | + |
|---|
| Start bp | 1449540 |
|---|
| End bp | 1450259 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 641275885 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001541191 |
|---|
| Protein GI | 159041939 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.128993 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCTTTTC GTGATGAGTT TTTGCGTTTG TTGAGGGAGG ATGCTGGGTT TAGGGGTGAG
GTTATGAGGC TTCTTGGTAT TAATGATGTT AATGCCTCCT TGGCTCGATT AATTGAGTCT
GTTAACGCAT TAACCAATGC CGTCAACACA CTCATTAAGG AGGAGACTGA AACTAGAAGC
GAAATAAAGA CACTACAAGA AGGACAAAAT AAACTATGGG AGGAAGTCAA GGCAATAAGA
GAGGAGAATA GTAAAATATG GCTTGAGATT AAGGCTATGA GGAAGAACTA TGAAAATGCA
TGGATTATTA CCAGGCAATT AAGAAGCGGT GTTAATATTG TTTCCAAGTA TTTGGATAAA
TTGCTTGAGC GTGATGTTAG GCATTATTTA CCCGTGTGGA TTAAGGATAA GTTAGGCTTC
AATGTTGATA AGCTTAAGAG GGTTGTGGTT GAGAATGTGG GTGGGTTTGA TGGTTATGTT
GAGGTTAATG ACTGGATTAT TGTGGTTGAG GTTAAGTCAA CTTTAAGGGT TAGGGATGCT
AATGATTTTA TTAATAGGCT TGCCAGGTTA AAGGTGATTA AGGCTAATAA GAGGATTACC
GCAGTGTTGG CTTATGTTAA TGATGTTAAG GAGACTGCGG AGGCTATTAA AGTACTTAAG
GCGTATGATG TAAAAGTGCT TAAGCATCAT GGTGAGGATG ATTTTGAGGA AGTAACTTAA
|
|---|
| Protein sequence | MSFRDEFLRL LREDAGFRGE VMRLLGINDV NASLARLIES VNALTNAVNT LIKEETETRS
EIKTLQEGQN KLWEEVKAIR EENSKIWLEI KAMRKNYENA WIITRQLRSG VNIVSKYLDK
LLERDVRHYL PVWIKDKLGF NVDKLKRVVV ENVGGFDGYV EVNDWIIVVE VKSTLRVRDA
NDFINRLARL KVIKANKRIT AVLAYVNDVK ETAEAIKVLK AYDVKVLKHH GEDDFEEVT
|
|---|
| |