Gene Cmaq_1368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1368 
Symbol 
ID5710260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1442653 
End bp1443294 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content42% 
IMG OID641275877 
Producthypothetical protein 
Protein accessionYP_001541184 
Protein GI159041932 
COG category[S] Function unknown 
COG ID[COG1865] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTAGGC AGGTTAAGGT GGTTAATGGG GACTTAATAC TAGTGTTAAG TAATGCCATG 
GATTCATTAT CAAGCACAGT TGATGGTGGT TTAAGGCATG GTATAAGGTA CATCATACAC
CACCACGTAC CCAGTAACTT CAATACTGAC CCAATGCTGG AGGTTAGGAG GGTTCATGAA
GCATTATTAA TTAATAGTAA TGAGGCGGTA ACATTCCTCA CAGCCACTGA ATTACCTAAG
AACCATGTGA TTAATGAGGA GAACATGTAT GGTTTAAGCG TCGTGGTCTC ATTGACCATT
GGTCTAAGTA ACCCCTATAG GATCAAGAAC GGTAACGTAA TTAGCCTACT ACGTAACCCC
TCAACGGTTA ATATAGCTGT AATTATTGAC GCTAATTTAA CTCAACAAGC CCTAGTTGAT
GCAGTAGCCC TAATAGCGGA AACCAAACAC GAGACCCTAA GTGAGTTAAC TAACGGTAAG
GTTCATGGAA CAACAAGCGA TGCAATAGCA GTATTATCCT CAGGTAATGG TGAATTAAGG
CCATATGCAG GCCCAGCCAC TGACGTGGGT AAGGCCATAA GCCACGCAGT GTACGGTGCC
TTGGTTAAGG CCTATGAGAT TAATCAATAT AAGGATCATT AA
 
Protein sequence
MIRQVKVVNG DLILVLSNAM DSLSSTVDGG LRHGIRYIIH HHVPSNFNTD PMLEVRRVHE 
ALLINSNEAV TFLTATELPK NHVINEENMY GLSVVVSLTI GLSNPYRIKN GNVISLLRNP
STVNIAVIID ANLTQQALVD AVALIAETKH ETLSELTNGK VHGTTSDAIA VLSSGNGELR
PYAGPATDVG KAISHAVYGA LVKAYEINQY KDH