| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1351 |
|---|
| Symbol | |
|---|
| ID | 5710270 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | - |
|---|
| Start bp | 1428256 |
|---|
| End bp | 1429344 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641275858 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_001541167 |
|---|
| Protein GI | 159041915 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGATAC AATTACTCTA CATGGGTTTA CTCCTAGTAC TGATACACGT TGCGGTACCG
TTAATTTACT ACATTATTAT CCTAACCTAC GCTAGGAGGC CTTGGTTAAT TAACTCAATT
AACGTTAATG ATGGTGAATT ACCCGCGGTA TCCATCATAA TACCTACATA TAATGAGGAG
AACATGATAC TGGGGAAGCT GGATAATATT CTTGAACAGA ATTACCCCCT GGATAAGATC
CAGTTAATAA TATCCGACTC AAGCAGTGAC AATACTCAGG TTAAGGTTGA GGAGTGGTTG
AGTAGGCATA GGGGAGTTAA CTTAAGTTAC ATTAAGGGCC CCAGGATGGG TAAGGGCCAT
GCATTAAATA AGGCGTTGGA GGCTGCGTCG GGTAGTATTA TAGTGACCAC TGATGCTGAT
TCACTTTGGG TTAAGGACTC ATTAATTAAC GCCGTTAAGT GGCTTAGTAA TGAGCAGGTG
GGTTTGGTTT CATGCGTAAA GGTACCTAGG GGTGGTGGAT CAACTGAGGA TGCCTATAGG
AGGCTTTACA ATACCTTGAG GATTGGGGAA AGTAAGATAC ACTCCACTGT TGTTTTCCAC
GGTGAATTAC TGGCTGTTAA GGGGGATTTA ATTAGGAGTA TTGGTGGTTT TCCAACGGAT
ATTGGTGCAG ATGACTCATA TACGGGAGTT AGGGTTGCCT CAATGGGTCT TAGAGCCGTG
ATTCCGGAGA ACGTGGTTTG CATGGAGTAT GTTCCAAGTA ATGGGTATAG TAGGTGGAGG
GTTAGGAGGG CTCAACACCT ATTGCAGAGC TTCATGAAGT CAATTAAGTT ACCTAAACCA
AGCAATTATA AACCAATCTA CTACACTGAA GCCTACATTC ACCTAATGAA CCCATGGCTA
CTCCCAATTG GCGCAATCCT GCTCCTAGCC TCAGGGAGCC TGTGGGCATA CGCCTTAATT
GCAGTGGGTT TAGTATTATT AGTGTGGTCA CCCTTCAGGG CTTGGGTAAC GCAGCAATTC
ATACTGATGT ACGCCATGGT CAGGAACCTG TGGACTAAGG AATTAATGTG GGAGAAGATT
AGTAAATAA
|
|---|
| Protein sequence | MLIQLLYMGL LLVLIHVAVP LIYYIIILTY ARRPWLINSI NVNDGELPAV SIIIPTYNEE
NMILGKLDNI LEQNYPLDKI QLIISDSSSD NTQVKVEEWL SRHRGVNLSY IKGPRMGKGH
ALNKALEAAS GSIIVTTDAD SLWVKDSLIN AVKWLSNEQV GLVSCVKVPR GGGSTEDAYR
RLYNTLRIGE SKIHSTVVFH GELLAVKGDL IRSIGGFPTD IGADDSYTGV RVASMGLRAV
IPENVVCMEY VPSNGYSRWR VRRAQHLLQS FMKSIKLPKP SNYKPIYYTE AYIHLMNPWL
LPIGAILLLA SGSLWAYALI AVGLVLLVWS PFRAWVTQQF ILMYAMVRNL WTKELMWEKI
SK
|
|---|
| |