| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1350 |
|---|
| Symbol | |
|---|
| ID | 5710356 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | + |
|---|
| Start bp | 1427607 |
|---|
| End bp | 1428239 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 641275857 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001541166 |
|---|
| Protein GI | 159041914 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4122] Predicted O-methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCGTG AAAGCATTGT GAACGCATTA TCAAGGGTAT TTAAGATTGA TAGAAGTGCA
GTGATTAGTG CCCTAAGTGG GTACAGTAAT GTTGATAATG TGTTAAGGGC AAGGTTAAGA
GGTAGGAGGC TATGGGGTGC GTTGTCACCT GAGAAGAGAC CGATACTTTA TGTAATAATT
AAGCTTCTTA AACCCAAGAT AGCCGTGGAG ACCGGCGTAG GGGCTGGTGT ATCCAGTACC
GTGATTCTAA GCGCCCTTAA TGAAATTAAC GATGGTTTAC TTTACTCCAT TGAGATAAAT
AGATACTATG ATGAGGTTAA CCCAGTGGGC TTCATTGTTC CAGAGGAGCT TAAGGCTAAG
TGGATTCTTC TAATAGGTAG TTCAAGGGAG TTACTTGAGA AAACCCTAAC CCAGCTGGGT
GATGTTCAAT TCTTCCTACA TGACAGTGAC CACAGTTATG ATAATGTATT ATTTGAACTT
AATGAGGCTT GGAGCCACAT GAGGCATGGA ATCATACTTA TTGATAATTA CAGGTTCAGT
AATGCAGCAG TGCAGTTTGC CAGGAGGGTT AATGCACCTT TAATAGAGTT AAGTGGTGAA
GCCGGTGGCT TAGCAATGAT ACCTAAGTTT TAA
|
|---|
| Protein sequence | MMRESIVNAL SRVFKIDRSA VISALSGYSN VDNVLRARLR GRRLWGALSP EKRPILYVII
KLLKPKIAVE TGVGAGVSST VILSALNEIN DGLLYSIEIN RYYDEVNPVG FIVPEELKAK
WILLIGSSRE LLEKTLTQLG DVQFFLHDSD HSYDNVLFEL NEAWSHMRHG IILIDNYRFS
NAAVQFARRV NAPLIELSGE AGGLAMIPKF
|
|---|
| |