Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1348 |
Symbol | |
ID | 5710354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1425416 |
End bp | 1427269 |
Gene Length | 1854 bp |
Protein Length | 617 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641275855 |
Product | hypothetical protein |
Protein accession | YP_001541164 |
Protein GI | 159041912 |
COG category | [C] Energy production and conversion |
COG ID | [COG0247] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTATTGC CTAAACCCAC CCCTGGTGGC GTATTGATTA GTTACGTGCT TTACCTAGTT AACGTACTAG TAGTGGTAAT CATAGTTTAC AGGCTTTACT CCGAGGCTAG GCGTGGTGGC TTAGGTTTAA GTGCAGCTAG GTTAATTAGA TTCATTAAGT ATGAGGCATC AAGTTACCGT AAAGGTATGG TGCATTTAAT GCACTTATCA ATACTACTCG GCGTCTCCTT ATCAATACTA TACACGTTAA TCTACCCATT AACCTACGGT AACCCAGTGG CGCATTACGT GATGTTCATT GCATCAACCC CATTAATACT AGGCTTAATC ACCGCCCTTG CCTGGAGGTT TAGGGTTCTT GCGGATTCAT TCAAGGTTTA CAGTGACTTA AGGATTGAGG AGGCTGTTAA GCGTAGATCC ATTATGCTTC AATCCATACT AATGCTTGTA ATAGTGTTAA CATCATTAAC CCTTGCATTA ACCCTATTCA CCGGGATCAT TTACATTGAG GTTAAGTTCA CGTTATCGAT TATTGACTAC GCATTAATAG CCACATACTA TGTTAAACCC GAGGTTAATC TTTACCTGAA CCTTGACTTG AATCTACCTA ACCTTAGGGA GGCCTTCAAC CTTAAGGATG TCCTCGAGGG TAAGGTGGAT GCATCCCAGG TTAAGGTGGG TGCGGAGAGG TTAAGTGACT TAGCTGACTA CGAGTTACGC AGCCTCGATG CATGCGTGGA GATTGGTGCA TGCGAGGAGG CTTGCCCAGC CACATTAGCA GGTAGGCCAT TATCACCGAG GATGTTCATT AGGAAGCTTA AGTACATTAA GGATTCAAAT GGACTTAATT CGGATTTGCT TAAGGTTATT ATTGATGATG AAGCTTGGTC ATGCACAACC TGCGGTGCAT GCGTCTACAA TTGCCCAATT GGGGTTAGGC ACATTGACTT AATAATTGAC GTGAGGAGGA GACTGGTTGA GTTAAGTAGG CTTGATCAAA AGAAGTCAAC ACTACTACTT AACATTACCC AGTACGGTAA CTCAATGGGG ATTAGTAATT ACGGTAGGCA TGAGTGGTTG AGGGAATTAG GGGTTAAGAC AGTTAAGGAG AATCCAGGCT TCAAGCACCT ACTATGGGTT GGATGCATGG GTAGCTTCGA CTCAAGGACT AGGGAGATTA TTAAATCCTT CATAGATATT ATTAAGGCTG CCGGTTTAAT TAATGACTTT GCAGTGCTTG GTGATGAAGA GACCTGCTGC GGTGACCCAT TGAGGAGACT TGGTGACGAG GGTAGGTTCC AGGAGGTGGC TTTAAACAAC ATTGAGGTCT TTAGGAGGTA TGGCGTTAAG AGTATAGTAA CCATATGCCC CCACGGTTAC AACACGTTCA GTAACGAGTA CCCTAAGTTG GATGAATACA TGAGGAATGT ATCAATTAAA CACCACACTC AATTCATAGC TGAGTTAATT GAGAAGGGGC TTGTGAAGGT TAAGGGAAGT GGAGAAGTAT TAACTATCCA TGACCCATGC TACTTAGCCA GGTATAATAA ATCCACTAAA CCGCAGAGGA TAATAGTCTC CTCAGTGGGT GTTCTCAAGG AGCCTAGAAA CAGTGGTGAG AGAACATTCT GCTGTGGGGC TGGTGGAGCT AATTACTGGT ATGATGTACC CGAGAGGAGT AGGATAAGTA GTATTAGGTT AAGTCAATTA ACCGAGACTG GGGCTAAGAC CATTGTGACG ATGTGCCCAT TCTGCAATGC AATGCTCAGT GACGCCGCAA GGGTGGGTGG ATTCAAGGGT AGGGTGATAG ATGTTGGTGA GCTTGTTAAG GAATCTATGG TGGGGCACCA TTAG
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Protein sequence | MVLPKPTPGG VLISYVLYLV NVLVVVIIVY RLYSEARRGG LGLSAARLIR FIKYEASSYR KGMVHLMHLS ILLGVSLSIL YTLIYPLTYG NPVAHYVMFI ASTPLILGLI TALAWRFRVL ADSFKVYSDL RIEEAVKRRS IMLQSILMLV IVLTSLTLAL TLFTGIIYIE VKFTLSIIDY ALIATYYVKP EVNLYLNLDL NLPNLREAFN LKDVLEGKVD ASQVKVGAER LSDLADYELR SLDACVEIGA CEEACPATLA GRPLSPRMFI RKLKYIKDSN GLNSDLLKVI IDDEAWSCTT CGACVYNCPI GVRHIDLIID VRRRLVELSR LDQKKSTLLL NITQYGNSMG ISNYGRHEWL RELGVKTVKE NPGFKHLLWV GCMGSFDSRT REIIKSFIDI IKAAGLINDF AVLGDEETCC GDPLRRLGDE GRFQEVALNN IEVFRRYGVK SIVTICPHGY NTFSNEYPKL DEYMRNVSIK HHTQFIAELI EKGLVKVKGS GEVLTIHDPC YLARYNKSTK PQRIIVSSVG VLKEPRNSGE RTFCCGAGGA NYWYDVPERS RISSIRLSQL TETGAKTIVT MCPFCNAMLS DAARVGGFKG RVIDVGELVK ESMVGHH
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