Gene Cmaq_1348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1348 
Symbol 
ID5710354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1425416 
End bp1427269 
Gene Length1854 bp 
Protein Length617 aa 
Translation table11 
GC content44% 
IMG OID641275855 
Producthypothetical protein 
Protein accessionYP_001541164 
Protein GI159041912 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTATTGC CTAAACCCAC CCCTGGTGGC GTATTGATTA GTTACGTGCT TTACCTAGTT 
AACGTACTAG TAGTGGTAAT CATAGTTTAC AGGCTTTACT CCGAGGCTAG GCGTGGTGGC
TTAGGTTTAA GTGCAGCTAG GTTAATTAGA TTCATTAAGT ATGAGGCATC AAGTTACCGT
AAAGGTATGG TGCATTTAAT GCACTTATCA ATACTACTCG GCGTCTCCTT ATCAATACTA
TACACGTTAA TCTACCCATT AACCTACGGT AACCCAGTGG CGCATTACGT GATGTTCATT
GCATCAACCC CATTAATACT AGGCTTAATC ACCGCCCTTG CCTGGAGGTT TAGGGTTCTT
GCGGATTCAT TCAAGGTTTA CAGTGACTTA AGGATTGAGG AGGCTGTTAA GCGTAGATCC
ATTATGCTTC AATCCATACT AATGCTTGTA ATAGTGTTAA CATCATTAAC CCTTGCATTA
ACCCTATTCA CCGGGATCAT TTACATTGAG GTTAAGTTCA CGTTATCGAT TATTGACTAC
GCATTAATAG CCACATACTA TGTTAAACCC GAGGTTAATC TTTACCTGAA CCTTGACTTG
AATCTACCTA ACCTTAGGGA GGCCTTCAAC CTTAAGGATG TCCTCGAGGG TAAGGTGGAT
GCATCCCAGG TTAAGGTGGG TGCGGAGAGG TTAAGTGACT TAGCTGACTA CGAGTTACGC
AGCCTCGATG CATGCGTGGA GATTGGTGCA TGCGAGGAGG CTTGCCCAGC CACATTAGCA
GGTAGGCCAT TATCACCGAG GATGTTCATT AGGAAGCTTA AGTACATTAA GGATTCAAAT
GGACTTAATT CGGATTTGCT TAAGGTTATT ATTGATGATG AAGCTTGGTC ATGCACAACC
TGCGGTGCAT GCGTCTACAA TTGCCCAATT GGGGTTAGGC ACATTGACTT AATAATTGAC
GTGAGGAGGA GACTGGTTGA GTTAAGTAGG CTTGATCAAA AGAAGTCAAC ACTACTACTT
AACATTACCC AGTACGGTAA CTCAATGGGG ATTAGTAATT ACGGTAGGCA TGAGTGGTTG
AGGGAATTAG GGGTTAAGAC AGTTAAGGAG AATCCAGGCT TCAAGCACCT ACTATGGGTT
GGATGCATGG GTAGCTTCGA CTCAAGGACT AGGGAGATTA TTAAATCCTT CATAGATATT
ATTAAGGCTG CCGGTTTAAT TAATGACTTT GCAGTGCTTG GTGATGAAGA GACCTGCTGC
GGTGACCCAT TGAGGAGACT TGGTGACGAG GGTAGGTTCC AGGAGGTGGC TTTAAACAAC
ATTGAGGTCT TTAGGAGGTA TGGCGTTAAG AGTATAGTAA CCATATGCCC CCACGGTTAC
AACACGTTCA GTAACGAGTA CCCTAAGTTG GATGAATACA TGAGGAATGT ATCAATTAAA
CACCACACTC AATTCATAGC TGAGTTAATT GAGAAGGGGC TTGTGAAGGT TAAGGGAAGT
GGAGAAGTAT TAACTATCCA TGACCCATGC TACTTAGCCA GGTATAATAA ATCCACTAAA
CCGCAGAGGA TAATAGTCTC CTCAGTGGGT GTTCTCAAGG AGCCTAGAAA CAGTGGTGAG
AGAACATTCT GCTGTGGGGC TGGTGGAGCT AATTACTGGT ATGATGTACC CGAGAGGAGT
AGGATAAGTA GTATTAGGTT AAGTCAATTA ACCGAGACTG GGGCTAAGAC CATTGTGACG
ATGTGCCCAT TCTGCAATGC AATGCTCAGT GACGCCGCAA GGGTGGGTGG ATTCAAGGGT
AGGGTGATAG ATGTTGGTGA GCTTGTTAAG GAATCTATGG TGGGGCACCA TTAG
 
Protein sequence
MVLPKPTPGG VLISYVLYLV NVLVVVIIVY RLYSEARRGG LGLSAARLIR FIKYEASSYR 
KGMVHLMHLS ILLGVSLSIL YTLIYPLTYG NPVAHYVMFI ASTPLILGLI TALAWRFRVL
ADSFKVYSDL RIEEAVKRRS IMLQSILMLV IVLTSLTLAL TLFTGIIYIE VKFTLSIIDY
ALIATYYVKP EVNLYLNLDL NLPNLREAFN LKDVLEGKVD ASQVKVGAER LSDLADYELR
SLDACVEIGA CEEACPATLA GRPLSPRMFI RKLKYIKDSN GLNSDLLKVI IDDEAWSCTT
CGACVYNCPI GVRHIDLIID VRRRLVELSR LDQKKSTLLL NITQYGNSMG ISNYGRHEWL
RELGVKTVKE NPGFKHLLWV GCMGSFDSRT REIIKSFIDI IKAAGLINDF AVLGDEETCC
GDPLRRLGDE GRFQEVALNN IEVFRRYGVK SIVTICPHGY NTFSNEYPKL DEYMRNVSIK
HHTQFIAELI EKGLVKVKGS GEVLTIHDPC YLARYNKSTK PQRIIVSSVG VLKEPRNSGE
RTFCCGAGGA NYWYDVPERS RISSIRLSQL TETGAKTIVT MCPFCNAMLS DAARVGGFKG
RVIDVGELVK ESMVGHH