| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1347 |
|---|
| Symbol | |
|---|
| ID | 5710353 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | + |
|---|
| Start bp | 1424116 |
|---|
| End bp | 1425270 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641275854 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_001541163 |
|---|
| Protein GI | 159041911 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATACCCG TAAGCGTCAT GGTTACAGGC TCAGGAACAG TATCAGTTAA GATTAAGGGT
AGATTCGGGG TTAATCACCC CAGTGAATTC TCAAGCCCAA TTAGGCCCGT TGTCTCATGG
AACATAACCA GGAGGTGTAA TTTAAAGTGC CTGCACTGTT ACATAAGTGC TGGTGATGCT
GATGAGAATG AGTTAACTAC TGAGGAGGCA ATGAACCTGG TGGAGCAGTT CAGTGAATTA
AAGGTCCCAT TAATACTATT CACTGGTGGT GAACCATTAA TGAGGGGTGA TTTAATTAAG
CTGGCTCACT ATGCTAGGGA TAAGGGTATT AGGATTGCCT TATCCACTAA TGGAACATTA
ATAACTAGGG AAATGGCCTC TAAACTGGCT GAAGCAGGCT TCTCATACAT TGGAGTCTCC
CTGGATTCAA TAAACAGTGA GTTTCATGAT AAATTCAGGG GGGTGGGGGG TGCCTTCGCT
AAGACTATCC TGGGTATTAG GAATGCCATT GATGCTGGGT TAGATGTTGG CTTAAGGTTC
ACCTTAACCT CAATGAACAT TAATGAGGTT TCATCGTACA TTGAATTCGC GTTATCACTG
GGTGTTAGGA GAATAACATT TTATCACCTA TCAGCCTCAG GTAGGGCTCA AAGGTTAAGT
AGGGATTGGT GGTATACACC GTCGCAGTAC GTTAAATTCA TGAATGATTT AATCAAGTAC
GCTAAGGATT ACTCAGGTAA AATTGAAATT GAAACAACCC TAGGTTCATT CGATGGAGTA
TACATAGCCC TAAAACTAGC TAAGAATAAG GAGGAATTAG ATAATTACCT CAGGTTCGTG
GAGTCAACGG GAGGCTGCGG TAGGAAGATA ATATCAATAT ACCCTAACGG TGACGTTTAC
CCATGCCAAT TCATAGACTT CATTAAGCTC GGTAACGTTA GGGAGAAGAG ACTAGCAGAC
ATATTAATGG AATCAAACCT AGACCTATTC GTAAACACTG AAAAATACCT TAAGGGACCT
AGGTGCTCCG CATGCCAATT TAAGAAGTAT TGTAAGGGTG GGGATAGGGC GAGGGCATAT
TACCTAACAG GTGACGTTTA CGGTGACGAC CCCCTCTGCC CAATACCAAG CATAATTAAT
AACCCGCAGG ATTAA
|
|---|
| Protein sequence | MIPVSVMVTG SGTVSVKIKG RFGVNHPSEF SSPIRPVVSW NITRRCNLKC LHCYISAGDA
DENELTTEEA MNLVEQFSEL KVPLILFTGG EPLMRGDLIK LAHYARDKGI RIALSTNGTL
ITREMASKLA EAGFSYIGVS LDSINSEFHD KFRGVGGAFA KTILGIRNAI DAGLDVGLRF
TLTSMNINEV SSYIEFALSL GVRRITFYHL SASGRAQRLS RDWWYTPSQY VKFMNDLIKY
AKDYSGKIEI ETTLGSFDGV YIALKLAKNK EELDNYLRFV ESTGGCGRKI ISIYPNGDVY
PCQFIDFIKL GNVREKRLAD ILMESNLDLF VNTEKYLKGP RCSACQFKKY CKGGDRARAY
YLTGDVYGDD PLCPIPSIIN NPQD
|
|---|
| |