| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1334 |
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| Symbol | |
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| ID | 5710430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 1410811 |
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| End bp | 1411632 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641275841 |
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| Product | ribosomal RNA adenine methylase transferase |
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| Protein accession | YP_001541150 |
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| Protein GI | 159041898 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
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| TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0549098 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.233187 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGTCGC TTAATGACTT TTACGCAGTC GATAAGTGGA CTCTAATTAA GTTAGCTAAG
TCAGCCCTAG GGCTTGGAAT TAGGGTTGGT GGCGATGTGC ACTTCATGGT TGATCCAGTT
TACCTTAACA CCATTGCGCA ATTAGCTAAG GATGAGAAGG TTCTTGAGGT GGGGTTTGGT
TTAAGTTACT TAACGCATTA CTTAGCTAAG TATGCTCAAC ACGTGTTCGC ATGTGATGTG
AATCCAATGA TGATCAAGGC CATTAAGGCT ATTGGGTTGA GTGAAGTTAA CGCTGACTTA
TTCATATGTG ATGCATTAAC CTACAAGCCA CCTATTGAAT TAACCGTGGT TTCAAACATA
CCCTATAGCA TTACATCAAG GTTACTGTTA AGATTACTAA CCGATTACGG GGCTAGGAAA
CTAATATTAA CGCTGCAGAG GGAGGTGGCC TTAAGGCTTG CAGCTAAGCC TGGCTCCACG
GATTACGGTA GGCTTTCTGT GATTACCCAA TGCCTGAGTC TAGTTAAGGT AATTAAGCAT
GTGCCTCCAT GGGCCTTTTG GCCAAGGCCT AAGGTGTATT CAGCAATTGT TGAGTTGAAG
CCCTTACCTA AACCATGCGT TGATGTTAGG GCTTTAGAAT CCTTAACAAG TAAATTATTC
ACCCAGCCTA ATAAGAAGGC TATTAAAGTT ATTAAGCAGT TTTACGGTTT AAGAGAGGGG
GAAGCGCCTA GTTACTTACT TAATAAGAGG GTTAGGGAGT TAAGCGTTAA TGAGGTTGCT
GAACTGGTTA ATGTTTTAAT CAACATGGGG AAAATTACGT AA
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| Protein sequence | MVSLNDFYAV DKWTLIKLAK SALGLGIRVG GDVHFMVDPV YLNTIAQLAK DEKVLEVGFG
LSYLTHYLAK YAQHVFACDV NPMMIKAIKA IGLSEVNADL FICDALTYKP PIELTVVSNI
PYSITSRLLL RLLTDYGARK LILTLQREVA LRLAAKPGST DYGRLSVITQ CLSLVKVIKH
VPPWAFWPRP KVYSAIVELK PLPKPCVDVR ALESLTSKLF TQPNKKAIKV IKQFYGLREG
EAPSYLLNKR VRELSVNEVA ELVNVLINMG KIT
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