Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1327 |
Symbol | |
ID | 5710071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 1401263 |
End bp | 1402231 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641275834 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_001541143 |
Protein GI | 159041891 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0010224 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.375909 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTCTAT TGGAGGTTAA GGATCTTAGC GTCACATATA GGACACCTTT CGGTACTGTT AAGGCTCTTG ATGACGTATC CTTTACACTG AATGAGGGCG AGGCCATTGC TGTTGTTGGT GAGAGCGGTT CAGGTAAATC AACACTTGCA TTAGCCATAA GTAGATTACT GCCGCCTAAT GCTAGGTTTA GGGGTAGTAT TATTTTTGAG GGCGTGGATT TAGCTAGGTT AAGTCCAAGT GAATTAAGGG TAATTAGGGG TACTGGTATA TTCATGGTGT TTCAGGAGCC GGCTAATAGT CTTAACCCAG TTTATAGAAT TAAGGATCAG TTAATGGAGG CTGTTAGGAT TAGGAGACTT AGGAGTAATG AGCCCTTTGA TGAGGGCGAG GCCTTGAAGG AGATAATAAG TACGCTTAGG GATGTGAGGA TGCCTGACCC TGAGATCATT ATAGAGAGGT ACCCTCATCA ATTGAGTGGT GGACAGATTC AGAGGATTAT GATAGCCATG GGCCTCCTCA TGAGGCCTAA ACTATATATT GCTGATGAAC CAACCTCAGC CCTCGACGTG ACTGTTCAGG CCCAAATACT TAAACTGCTT AAGGATCTTA AGAATGAATA TAATTTATCA ATAATATTCA TAACCCATGA CTTAGCGGTG GCGTCAATAA TTGGGGATAA GGTAATGGTA ATGTACGCTG GTCAAATAGT TGAGGAGGGT TTAATGAGTG ATGTAATCAC TAAACCCTAC CACCCATACA CGCAGGGGTT ATTGAGTAGT TTACCGAGGA TAAGTAAGTA TGAGGGTAAG TTACCTATAA TAAGCGGTGC GGTACCAAGC CTAATTAACC CACCCTCAGG CTGTAGATTC CACCCAAGGT GCCCATACGC CACTGACACG TGTATTAAGG TAATGCCTCA ACTTAAGAAT GTTGAGAATA GGAGGGTGAG GTGCCACCTC TATGCCTGA
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Protein sequence | MALLEVKDLS VTYRTPFGTV KALDDVSFTL NEGEAIAVVG ESGSGKSTLA LAISRLLPPN ARFRGSIIFE GVDLARLSPS ELRVIRGTGI FMVFQEPANS LNPVYRIKDQ LMEAVRIRRL RSNEPFDEGE ALKEIISTLR DVRMPDPEII IERYPHQLSG GQIQRIMIAM GLLMRPKLYI ADEPTSALDV TVQAQILKLL KDLKNEYNLS IIFITHDLAV ASIIGDKVMV MYAGQIVEEG LMSDVITKPY HPYTQGLLSS LPRISKYEGK LPIISGAVPS LINPPSGCRF HPRCPYATDT CIKVMPQLKN VENRRVRCHL YA
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