Gene Cmaq_1322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1322 
Symbol 
ID5710209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1397364 
End bp1397720 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content39% 
IMG OID641275829 
Producthypothetical protein 
Protein accessionYP_001541138 
Protein GI159041886 
COG category[R] General function prediction only 
COG ID[COG2044] Predicted peroxiredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.070069 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.542385 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAG GTAAAGGTAG AATAATCTTC TTCACCACAA TACCTCCCTC GGAGGAGGAT 
AGGATTCAGG CAATGTTAAG GATTGCGTTA ATAGCATCAT CACTGGGTTA TGAAGTAATA
ATCTACCTCG CATTACACTC AGTAATGATT GTTAAGAGGA GTGTGTTTGA AAAGTTAAGT
GACAATATAA GGAGTATGAT AACTGATGCG GTGAAGAGGA ATGTTAAGAT TATGGCGTGT
AAAGTGGCAA TGGAGGGTTT TAATGTTAAG GAGGGGGATC TTATAAGTGG TGTTATTACC
GCTGAACCAA GGGATCTTTT TGAATACGCT AGGAACGCTA TTACCGTATC TTGGTAA
 
Protein sequence
MSEGKGRIIF FTTIPPSEED RIQAMLRIAL IASSLGYEVI IYLALHSVMI VKRSVFEKLS 
DNIRSMITDA VKRNVKIMAC KVAMEGFNVK EGDLISGVIT AEPRDLFEYA RNAITVSW